Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NEDD4P46934 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.37□□□□□ -1.87
NEDD4P46934 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD4P46934 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD4P46934 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD4P46934 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD4P46934 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NEDD4P46934 SNORA4.1-201ENST00000364263 144 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 MIR181A2-201ENST00000384863 110 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AL121972.1-201ENST00000402023 252 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AL451074.5-201ENST00000415894 435 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AL035407.1-201ENST00000429211 571 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD4P46934 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.36□□□□□ -1.87
NEDD4P46934 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD4P46934 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD4P46934 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.36□□□□□ -1.87
NEDD4P46934 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD4P46934 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD4P46934 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD4P46934 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
NEDD4P46934 AP001025.2-201ENST00000490908 477 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AC147055.4-201ENST00000504399 745 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AC097462.2-201ENST00000504623 481 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AC093281.2-201ENST00000510153 597 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD4P46934 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NEDD4P46934 RNA5SP216-201ENST00000516111 123 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD4P46934 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.36□□□□□ -1.87
NEDD4P46934 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD4P46934 ELOCP32-201ENST00000548625 324 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD4P46934 AC107954.1-201ENST00000565906 727 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AC055876.1-202ENST00000567053 138 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 ISCA1P3-201ENST00000577104 373 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD4P46934 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
NEDD4P46934 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.36□□□□□ -1.87
NEDD4P46934 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.36□□□□□ -1.87
NEDD4P46934 AL139418.1-201ENST00000613613 177 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 AL356473.1-201ENST00000406203 1408 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 OR4G11P-202ENST00000642116 1414 ntBASIC3.36□□□□□ -1.87
NEDD4P46934 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NEDD4P46934 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NEDD4P46934 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NEDD4P46934 AP002907.1-201ENST00000606361 1430 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NEDD4P46934 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD4P46934 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD4P46934 VPS26BP1-201ENST00000417155 755 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 SDCBPP3-201ENST00000419629 891 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 FNDC3CP-201ENST00000420795 1155 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD4P46934 AC006548.1-201ENST00000427470 102 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 RPL7P34-201ENST00000433316 712 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 VDAC1P3-201ENST00000434069 851 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AL662791.1-201ENST00000441992 928 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.35□□□□□ -1.87
NEDD4P46934 SUMO2P2-201ENST00000456482 255 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 ATG12P2-201ENST00000456830 416 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 RPS20P24-201ENST00000457473 361 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC096576.1-201ENST00000489014 359 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.35□□□□□ -1.87
NEDD4P46934 TMEM251P1-201ENST00000503717 318 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.35□□□□□ -1.87
NEDD4P46934 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD4P46934 AC091826.1-201ENST00000514065 313 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 GMPSP1-201ENST00000514075 579 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD4P46934 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD4P46934 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NEDD4P46934 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD4P46934 MRPS36P5-201ENST00000551909 298 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 CYCSP2-201ENST00000558168 301 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.35□□□□□ -1.87
NEDD4P46934 AC090616.5-202ENST00000582111 297 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NEDD4P46934 MAGOH2P-202ENST00000584384 429 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AL669831.4-202ENST00000590817 238 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC021171.1-201ENST00000603137 706 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC012119.1-201ENST00000603184 222 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC006254.3-201ENST00000603353 884 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC012531.5-201ENST00000611375 151 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.35□□□□□ -1.87
NEDD4P46934 AC025588.4-201ENST00000615802 908 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AP003485.2-201ENST00000623636 610 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC004943.3-201ENST00000624116 600 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 CR381572.1-201ENST00000625098 102 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.35□□□□□ -1.87
NEDD4P46934 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NEDD4P46934 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NEDD4P46934 AC007336.1-201ENST00000576365 3828 ntBASIC3.35□□□□□ -1.87
NEDD4P46934 AC097714.1-201ENST00000511272 1647 ntBASIC3.34□□□□□ -1.87
NEDD4P46934 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
NEDD4P46934 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.34□□□□□ -1.87
NEDD4P46934 AC108206.1-201ENST00000570186 4159 ntBASIC3.34□□□□□ -1.87
NEDD4P46934 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
NEDD4P46934 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms