Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 snoU13.8-201ENST00000458890 104 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 RPL7P38-201ENST00000488396 739 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.43□□□□□ -1.86
HNF4AP41235 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.43□□□□□ -1.86
HNF4AP41235 PCBP2P3-201ENST00000509726 843 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AC006445.2-201ENST00000510061 472 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AC109464.2-201ENST00000510242 943 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 RNY4P37-201ENST00000516225 96 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.43□□□□□ -1.86
HNF4AP41235 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.43□□□□□ -1.86
HNF4AP41235 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.43□□□□□ -1.86
HNF4AP41235 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.43□□□□□ -1.86
HNF4AP41235 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
HNF4AP41235 DNAJC8P1-201ENST00000554535 372 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.43□□□□□ -1.86
HNF4AP41235 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.43□□□□□ -1.86
HNF4AP41235 AC020914.6-201ENST00000594327 272 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AC011451.2-201ENST00000604303 598 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.43□□□□□ -1.86
HNF4AP41235 AL590099.1-201ENST00000615276 138 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AL136981.2-201ENST00000617319 734 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AL357080.1-201ENST00000617394 239 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 MIR6130-201ENST00000619419 109 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 U4.6-201ENST00000621618 127 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AC039056.2-201ENST00000622261 511 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 AC007494.3-201ENST00000624660 743 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HNF4AP41235 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HNF4AP41235 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HNF4AP41235 AC005832.2-201ENST00000538921 1430 ntBASIC3.43□□□□□ -1.86
HNF4AP41235 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.43□□□□□ -1.86
HNF4AP41235 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HNF4AP41235 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.42□□□□□ -1.86
HNF4AP41235 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HNF4AP41235 AL390862.1-201ENST00000635467 1469 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AL445523.1-201ENST00000451184 1362 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HNF4AP41235 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.42□□□□□ -1.86
HNF4AP41235 RNA5SP252-201ENST00000391131 119 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.42□□□□□ -1.86
HNF4AP41235 MORF4L1P6-201ENST00000418771 268 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.42□□□□□ -1.86
HNF4AP41235 DPPA2P1-201ENST00000428060 556 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AL158071.1-201ENST00000430315 461 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 RPL26P6-201ENST00000440913 438 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.42□□□□□ -1.86
HNF4AP41235 AL031183.1-201ENST00000457667 207 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 SNORA84-201ENST00000459229 133 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AC097493.1-201ENST00000463958 372 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AP002884.2-201ENST00000471647 395 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 RPL31P60-201ENST00000478450 367 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HNF4AP41235 FAM172BP-201ENST00000487497 1089 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.42□□□□□ -1.86
HNF4AP41235 LTV1P1-201ENST00000510683 1237 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.42□□□□□ -1.86
HNF4AP41235 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.42□□□□□ -1.86
HNF4AP41235 AC026801.2-201ENST00000515352 425 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 RN7SKP18-201ENST00000516005 275 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.42□□□□□ -1.86
HNF4AP41235 AC026333.2-201ENST00000542164 106 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.42□□□□□ -1.86
HNF4AP41235 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.42□□□□□ -1.86
HNF4AP41235 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.42□□□□□ -1.86
HNF4AP41235 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.42□□□□□ -1.86
HNF4AP41235 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.42□□□□□ -1.86
HNF4AP41235 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.42□□□□□ -1.86
HNF4AP41235 HSPE1P7-201ENST00000604681 321 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AC112220.3-201ENST00000605502 502 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AC004223.4-201ENST00000612426 332 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AC022149.2-201ENST00000621061 203 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AC027309.3-201ENST00000623419 351 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AF246928.1-201ENST00000623768 87 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 AC231657.1-201ENST00000624313 397 ntBASIC3.42□□□□□ -1.86
HNF4AP41235 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.42□□□□□ -1.86
HNF4AP41235 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.42□□□□□ -1.86
HNF4AP41235 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.42□□□□□ -1.86
HNF4AP41235 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.42□□□□□ -1.86
HNF4AP41235 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.41□□□□□ -1.86
HNF4AP41235 TPTE2P4-201ENST00000258589 1605 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.41□□□□□ -1.86
HNF4AP41235 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HNF4AP41235 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HNF4AP41235 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
HNF4AP41235 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HNF4AP41235 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HNF4AP41235 RNU5A-1-201ENST00000362698 116 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 SNORA4.1-201ENST00000364263 144 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HNF4AP41235 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HNF4AP41235 CD24P4-201ENST00000382840 243 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 RNU6-1027P-201ENST00000383998 107 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.41□□□□□ -1.86
HNF4AP41235 HSFY4P-201ENST00000415994 1181 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AC092473.1-201ENST00000441098 221 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AL357552.1-201ENST00000445254 415 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AL133547.1-201ENST00000448546 220 ntBASIC3.41□□□□□ -1.86
HNF4AP41235 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.41□□□□□ -1.86
HNF4AP41235 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms