Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 RPL37P21-201ENST00000435890 276 ntBASIC3.18□□□□□ -1.9
SOX3P41225 AC091862.1-201ENST00000438016 1100 ntBASIC3.18□□□□□ -1.9
SOX3P41225 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX3P41225 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX3P41225 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.18□□□□□ -1.9
SOX3P41225 Z82190.1-201ENST00000454534 490 ntBASIC3.18□□□□□ -1.9
SOX3P41225 RPS20P32-201ENST00000456044 356 ntBASIC3.18□□□□□ -1.9
SOX3P41225 snoU13.22-201ENST00000459428 104 ntBASIC3.18□□□□□ -1.9
SOX3P41225 AC116337.2-201ENST00000477662 156 ntBASIC3.18□□□□□ -1.9
SOX3P41225 AC034222.1-201ENST00000494052 532 ntBASIC3.18□□□□□ -1.9
SOX3P41225 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX3P41225 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.18□□□□□ -1.9
SOX3P41225 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX3P41225 AC117532.1-201ENST00000514638 323 ntBASIC3.18□□□□□ -1.9
SOX3P41225 RNU6-1095P-201ENST00000516148 108 ntBASIC3.18□□□□□ -1.9
SOX3P41225 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
SOX3P41225 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.18□□□□□ -1.9
SOX3P41225 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX3P41225 AC026333.2-201ENST00000542164 106 ntBASIC3.18□□□□□ -1.9
SOX3P41225 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.18□□□□□ -1.9
SOX3P41225 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.18□□□□□ -1.9
SOX3P41225 ACTR3BP3-201ENST00000565577 979 ntBASIC3.18□□□□□ -1.9
SOX3P41225 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX3P41225 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX3P41225 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.18□□□□□ -1.9
SOX3P41225 AL031985.2-201ENST00000600955 480 ntBASIC3.18□□□□□ -1.9
SOX3P41225 XIAPP1-201ENST00000603162 600 ntBASIC3.18□□□□□ -1.9
SOX3P41225 AC012468.1-201ENST00000604888 430 ntBASIC3.18□□□□□ -1.9
SOX3P41225 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SOX3P41225 AL031775.1-201ENST00000607014 887 ntBASIC3.18□□□□□ -1.9
SOX3P41225 AC012360.2-201ENST00000609349 391 ntBASIC3.18□□□□□ -1.9
SOX3P41225 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.18□□□□□ -1.9
SOX3P41225 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.18□□□□□ -1.9
SOX3P41225 Z69908.1-201ENST00000622603 247 ntBASIC3.18□□□□□ -1.9
SOX3P41225 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SOX3P41225 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
SOX3P41225 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SOX3P41225 PABPC1P9-201ENST00000426076 1612 ntBASIC3.18□□□□□ -1.9
SOX3P41225 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SOX3P41225 MFSD8-233ENST00000641482 4860 ntBASIC3.18□□□□□ -1.9
SOX3P41225 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
SOX3P41225 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SOX3P41225 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOX3P41225 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.17□□□□□ -1.9
SOX3P41225 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SOX3P41225 RNA5SP387-201ENST00000364226 106 ntBASIC3.17□□□□□ -1.9
SOX3P41225 Y_RNA.548-201ENST00000384656 105 ntBASIC3.17□□□□□ -1.9
SOX3P41225 RNVU1-14-201ENST00000384770 164 ntBASIC3.17□□□□□ -1.9
SOX3P41225 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SOX3P41225 RNA5SP107-201ENST00000411358 122 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.17□□□□□ -1.9
SOX3P41225 AC109780.2-201ENST00000413467 845 ntBASIC3.17□□□□□ -1.9
SOX3P41225 EI24P1-201ENST00000416584 867 ntBASIC3.17□□□□□ -1.9
SOX3P41225 SEPT2P1-201ENST00000419651 180 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC099677.1-201ENST00000420575 175 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.17□□□□□ -1.9
SOX3P41225 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.17□□□□□ -1.9
SOX3P41225 AC109583.1-201ENST00000432156 268 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.17□□□□□ -1.9
SOX3P41225 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.17□□□□□ -1.9
SOX3P41225 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.17□□□□□ -1.9
SOX3P41225 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.17□□□□□ -1.9
SOX3P41225 RPL31P3-201ENST00000458430 332 ntBASIC3.17□□□□□ -1.9
SOX3P41225 SNORD121B-201ENST00000458838 81 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AP001086.1-201ENST00000494882 321 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.17□□□□□ -1.9
SOX3P41225 RNU2-58P-201ENST00000516403 183 ntBASIC3.17□□□□□ -1.9
SOX3P41225 IGKV2-26-201ENST00000518305 343 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.17□□□□□ -1.9
SOX3P41225 AP003497.1-201ENST00000528472 562 ntBASIC3.17□□□□□ -1.9
SOX3P41225 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SOX3P41225 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.17□□□□□ -1.9
SOX3P41225 AC018630.1-201ENST00000541376 925 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.17□□□□□ -1.9
SOX3P41225 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.17□□□□□ -1.9
SOX3P41225 CR383656.7-201ENST00000548164 174 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC126177.3-201ENST00000551839 688 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC011611.1-201ENST00000552179 197 ntBASIC3.17□□□□□ -1.9
SOX3P41225 NCAPGP2-201ENST00000557911 754 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC006270.2-201ENST00000578523 652 ntBASIC3.17□□□□□ -1.9
SOX3P41225 MIR5047-201ENST00000579212 100 ntBASIC3.17□□□□□ -1.9
SOX3P41225 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.17□□□□□ -1.9
SOX3P41225 PRELID3BP8-201ENST00000604148 295 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC012531.5-201ENST00000611375 151 ntBASIC3.17□□□□□ -1.9
SOX3P41225 AC002550.2-201ENST00000621246 394 ntBASIC3.17□□□□□ -1.9
SOX3P41225 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SOX3P41225 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.17□□□□□ -1.9
SOX3P41225 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOX3P41225 AL157700.1-201ENST00000561973 1432 ntBASIC3.17□□□□□ -1.9
SOX3P41225 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.17□□□□□ -1.9
SOX3P41225 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOX3P41225 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SOX3P41225 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.16□□□□□ -1.9
SOX3P41225 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SOX3P41225 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.16□□□□□ -1.9
SOX3P41225 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
SOX3P41225 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SOX3P41225 AC010733.2-201ENST00000589496 5702 ntBASIC3.16□□□□□ -1.9
SOX3P41225 Y_RNA.77-201ENST00000362962 107 ntBASIC3.16□□□□□ -1.9
SOX3P41225 RNU6-97P-201ENST00000363387 104 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms