Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SNORA40.3-201ENST00000390964 122 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 HMGN1P14-201ENST00000412459 517 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 RPL31P45-201ENST00000419532 356 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL15A1P39059 OR51AB1P-201ENST00000429046 620 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 PSMA2P3-201ENST00000429685 675 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 GDI2P2-201ENST00000445131 608 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.35□□□□□ -1.71
COL15A1P39059 HMGB1P15-201ENST00000453854 435 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.35□□□□□ -1.71
COL15A1P39059 AP001025.2-201ENST00000490908 477 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.35□□□□□ -1.71
COL15A1P39059 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.35□□□□□ -1.71
COL15A1P39059 AC109464.2-201ENST00000510242 943 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.35□□□□□ -1.71
COL15A1P39059 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.35□□□□□ -1.71
COL15A1P39059 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.35□□□□□ -1.71
COL15A1P39059 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.35□□□□□ -1.71
COL15A1P39059 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL15A1P39059 AC099489.2-201ENST00000574976 260 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.35□□□□□ -1.71
COL15A1P39059 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.35□□□□□ -1.71
COL15A1P39059 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.35□□□□□ -1.71
COL15A1P39059 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.35□□□□□ -1.71
COL15A1P39059 AC067852.3-201ENST00000589177 561 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 LLPHP1-201ENST00000603571 367 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 AL136363.2-201ENST00000604173 851 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 AC010680.4-201ENST00000605334 543 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.35□□□□□ -1.71
COL15A1P39059 AC008498.1-201ENST00000613012 531 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 AC004009.2-201ENST00000623016 728 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 MIR4496-201ENST00000635896 61 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 CRYM-AS1-204ENST00000637983 556 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL15A1P39059 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL15A1P39059 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.35□□□□□ -1.71
COL15A1P39059 AC007390.2-201ENST00000606229 3803 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
COL15A1P39059 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
COL15A1P39059 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL15A1P39059 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL15A1P39059 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL15A1P39059 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL15A1P39059 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.34□□□□□ -1.71
COL15A1P39059 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.34□□□□□ -1.71
COL15A1P39059 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.34□□□□□ -1.71
COL15A1P39059 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL15A1P39059 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.34□□□□□ -1.71
COL15A1P39059 USP9YP13-201ENST00000417797 480 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.34□□□□□ -1.71
COL15A1P39059 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.34□□□□□ -1.71
COL15A1P39059 AC109583.1-201ENST00000432156 268 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 MRPS18BP2-201ENST00000434310 759 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.34□□□□□ -1.71
COL15A1P39059 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.34□□□□□ -1.71
COL15A1P39059 AL590365.1-201ENST00000450788 243 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.34□□□□□ -1.71
COL15A1P39059 AL033528.1-201ENST00000453780 140 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 MTCYBP1-201ENST00000454315 1119 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.34□□□□□ -1.71
COL15A1P39059 RPS3AP14-201ENST00000483907 780 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 AC006445.1-201ENST00000491925 405 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.34□□□□□ -1.71
COL15A1P39059 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.34□□□□□ -1.71
COL15A1P39059 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.34□□□□□ -1.71
COL15A1P39059 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.34□□□□□ -1.71
COL15A1P39059 RN7SKP298-201ENST00000515950 94 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.34□□□□□ -1.71
COL15A1P39059 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.34□□□□□ -1.71
COL15A1P39059 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL15A1P39059 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.34□□□□□ -1.71
COL15A1P39059 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.34□□□□□ -1.71
COL15A1P39059 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL15A1P39059 CENPUP2-201ENST00000555897 1186 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 MIR5697-201ENST00000578045 78 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.34□□□□□ -1.71
COL15A1P39059 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.34□□□□□ -1.71
COL15A1P39059 AC020914.4-201ENST00000597690 277 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 AC015871.2-201ENST00000603605 948 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 NDUFA8P1-201ENST00000605525 367 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 AC008250.2-201ENST00000615261 205 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 AC108479.2-201ENST00000617314 601 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.34□□□□□ -1.71
COL15A1P39059 AL445264.1-201ENST00000621719 171 ntBASIC4.34□□□□□ -1.71
COL15A1P39059 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.34□□□□□ -1.71
COL15A1P39059 ZNF33CP-201ENST00000432492 2030 ntBASIC4.34□□□□□ -1.72
COL15A1P39059 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.72
COL15A1P39059 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
COL15A1P39059 AC097714.1-201ENST00000511272 1647 ntBASIC4.34□□□□□ -1.72
COL15A1P39059 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
COL15A1P39059 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.33□□□□□ -1.72
COL15A1P39059 AL139811.1-201ENST00000424779 2299 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.33□□□□□ -1.72
COL15A1P39059 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL15A1P39059 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL15A1P39059 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL15A1P39059 AL391417.1-201ENST00000404100 426 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 RN7SKP284-201ENST00000411002 343 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms