Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.41□□□□□ -2.02
RPA3P35244 RNU6-1155P-201ENST00000363554 107 ntBASIC2.41□□□□□ -2.02
RPA3P35244 RNA5SP139-201ENST00000364340 117 ntBASIC2.41□□□□□ -2.02
RPA3P35244 SNORA80E-201ENST00000384744 137 ntBASIC2.41□□□□□ -2.02
RPA3P35244 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.41□□□□□ -2.02
RPA3P35244 RNU2-15P-201ENST00000410692 191 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.41□□□□□ -2.02
RPA3P35244 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.41□□□□□ -2.02
RPA3P35244 AL137014.1-201ENST00000420490 1226 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.41□□□□□ -2.02
RPA3P35244 RSL24D1P8-201ENST00000434442 492 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AC092573.2-201ENST00000434546 243 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.41□□□□□ -2.02
RPA3P35244 RAC1P7-201ENST00000445367 377 ntBASIC2.41□□□□□ -2.02
RPA3P35244 GXYLT1P1-201ENST00000446657 490 ntBASIC2.41□□□□□ -2.02
RPA3P35244 RPL7P55-201ENST00000450522 746 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.41□□□□□ -2.02
RPA3P35244 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.41□□□□□ -2.02
RPA3P35244 Z82190.1-201ENST00000454534 490 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AC126389.1-201ENST00000477436 290 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AC107222.1-201ENST00000510899 637 ntBASIC2.41□□□□□ -2.02
RPA3P35244 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.41□□□□□ -2.02
RPA3P35244 RNU4-29P-201ENST00000515943 174 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AC103783.1-201ENST00000520506 373 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.41□□□□□ -2.02
RPA3P35244 CASP1P1-201ENST00000526345 212 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RPA3P35244 UBTFL10-201ENST00000528532 562 ntBASIC2.41□□□□□ -2.02
RPA3P35244 HSPE1P20-201ENST00000538133 289 ntBASIC2.41□□□□□ -2.02
RPA3P35244 PRELID2P1-201ENST00000552837 301 ntBASIC2.41□□□□□ -2.02
RPA3P35244 SULT1C2P1-202ENST00000562418 459 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AC234778.2-201ENST00000566241 354 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.41□□□□□ -2.02
RPA3P35244 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.41□□□□□ -2.02
RPA3P35244 MIR3162-201ENST00000581818 82 ntBASIC2.41□□□□□ -2.02
RPA3P35244 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.41□□□□□ -2.02
RPA3P35244 AC010620.2-201ENST00000600135 313 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AC007621.1-201ENST00000604544 437 ntBASIC2.41□□□□□ -2.02
RPA3P35244 AC027309.3-201ENST00000623419 351 ntBASIC2.41□□□□□ -2.02
RPA3P35244 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
RPA3P35244 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.41□□□□□ -2.02
RPA3P35244 GDI2P1-201ENST00000429312 1336 ntBASIC2.41□□□□□ -2.02
RPA3P35244 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.02
RPA3P35244 SNORD56.5-201ENST00000364281 72 ntBASIC2.4□□□□□ -2.03
RPA3P35244 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RPA3P35244 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.4□□□□□ -2.03
RPA3P35244 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
RPA3P35244 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RPA3P35244 RNU6-882P-201ENST00000391025 103 ntBASIC2.4□□□□□ -2.03
RPA3P35244 MTCO2P31-201ENST00000402702 684 ntBASIC2.4□□□□□ -2.03
RPA3P35244 RPL19P1-201ENST00000411635 428 ntBASIC2.4□□□□□ -2.03
RPA3P35244 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.4□□□□□ -2.03
RPA3P35244 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.4□□□□□ -2.03
RPA3P35244 AL357078.2-201ENST00000416486 427 ntBASIC2.4□□□□□ -2.03
RPA3P35244 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.4□□□□□ -2.03
RPA3P35244 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.4□□□□□ -2.03
RPA3P35244 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.4□□□□□ -2.03
RPA3P35244 PNPLA4P1-201ENST00000458328 305 ntBASIC2.4□□□□□ -2.03
RPA3P35244 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.4□□□□□ -2.03
RPA3P35244 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.4□□□□□ -2.03
RPA3P35244 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RPA3P35244 RPL21P131-201ENST00000497298 483 ntBASIC2.4□□□□□ -2.03
RPA3P35244 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RPA3P35244 AC069306.1-201ENST00000507006 843 ntBASIC2.4□□□□□ -2.03
RPA3P35244 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.4□□□□□ -2.03
RPA3P35244 AC118282.2-201ENST00000508739 374 ntBASIC2.4□□□□□ -2.03
RPA3P35244 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.4□□□□□ -2.03
RPA3P35244 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RPA3P35244 OR5AK1P-201ENST00000524837 922 ntBASIC2.4□□□□□ -2.03
RPA3P35244 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.4□□□□□ -2.03
RPA3P35244 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.4□□□□□ -2.03
RPA3P35244 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.4□□□□□ -2.03
RPA3P35244 AC090695.1-201ENST00000561269 1222 ntBASIC2.4□□□□□ -2.03
RPA3P35244 RPL23AP78-201ENST00000599928 470 ntBASIC2.4□□□□□ -2.03
RPA3P35244 RPL12P50-201ENST00000603116 116 ntBASIC2.4□□□□□ -2.03
RPA3P35244 AC026790.2-201ENST00000606282 430 ntBASIC2.4□□□□□ -2.03
RPA3P35244 AC100814.1-201ENST00000606963 623 ntBASIC2.4□□□□□ -2.03
RPA3P35244 AC067747.1-201ENST00000608026 250 ntBASIC2.4□□□□□ -2.03
RPA3P35244 AP002826.1-201ENST00000608835 315 ntBASIC2.4□□□□□ -2.03
RPA3P35244 AC003001.2-201ENST00000616294 831 ntBASIC2.4□□□□□ -2.03
RPA3P35244 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.4□□□□□ -2.03
RPA3P35244 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RPA3P35244 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RPA3P35244 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.4□□□□□ -2.03
RPA3P35244 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RPA3P35244 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
RPA3P35244 MTCO1P23-201ENST00000415223 1526 ntBASIC2.39□□□□□ -2.03
RPA3P35244 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
RPA3P35244 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
RPA3P35244 MIR16-2-201ENST00000362117 81 ntBASIC2.39□□□□□ -2.03
RPA3P35244 RNU1-138P-201ENST00000384093 164 ntBASIC2.39□□□□□ -2.03
RPA3P35244 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RPA3P35244 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.39□□□□□ -2.03
RPA3P35244 AL355615.1-201ENST00000406187 641 ntBASIC2.39□□□□□ -2.03
RPA3P35244 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.39□□□□□ -2.03
RPA3P35244 AL513477.1-202ENST00000417061 214 ntBASIC2.39□□□□□ -2.03
RPA3P35244 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.39□□□□□ -2.03
RPA3P35244 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.39□□□□□ -2.03
RPA3P35244 RPS3P1-201ENST00000456781 192 ntBASIC2.39□□□□□ -2.03
RPA3P35244 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms