Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC012531.5-201ENST00000611375 151 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 AC107905.1-201ENST00000616204 426 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 FAM157B-203ENST00000639350 358 ntBASIC2.13□□□□□ -2.07
COL4A5P29400 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.13□□□□□ -2.07
COL4A5P29400 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.13□□□□□ -2.07
COL4A5P29400 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
COL4A5P29400 RNU6-185P-201ENST00000384421 107 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 FNDC3CP-201ENST00000420795 1155 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A5P29400 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A5P29400 RPL12P25-201ENST00000455592 494 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 BX322784.1-201ENST00000455793 1077 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 AC109486.1-201ENST00000486833 374 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A5P29400 MTCYBP17-201ENST00000503579 789 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 MTCO2P32-201ENST00000514865 403 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.12□□□□□ -2.07
COL4A5P29400 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A5P29400 MTND5P21-201ENST00000531961 522 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A5P29400 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
COL4A5P29400 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A5P29400 AC115085.1-201ENST00000588924 229 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 AC110792.4-201ENST00000609843 298 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
COL4A5P29400 uc_338.5-201ENST00000611839 155 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A5P29400 Y_RNA.374-201ENST00000365606 101 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL4A5P29400 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.12□□□□□ -2.07
COL4A5P29400 POLR2J4-204ENST00000418424 324 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 TOMM22P1-201ENST00000418578 312 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A5P29400 RNU6-717P-201ENST00000459076 104 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 SUMO1P1-201ENST00000497904 306 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A5P29400 RNU6-826P-201ENST00000516827 104 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 RN7SKP40-201ENST00000517211 242 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A5P29400 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.12□□□□□ -2.07
COL4A5P29400 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.12□□□□□ -2.07
COL4A5P29400 AC103810.1-201ENST00000579873 453 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 AC090425.2-201ENST00000608818 501 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.12□□□□□ -2.07
COL4A5P29400 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.12□□□□□ -2.07
COL4A5P29400 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
COL4A5P29400 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL4A5P29400 MTND5P3-201ENST00000438536 1800 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL4A5P29400 RNA5SP295-201ENST00000362655 121 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 Y_RNA.191-201ENST00000363972 113 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 SNORA26.7-201ENST00000391288 122 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 BTBD10P2-201ENST00000404779 676 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 MIR1323-201ENST00000408090 73 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 RNU2-71P-201ENST00000411395 189 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 AC093392.2-201ENST00000450682 337 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 ATG10-AS1-201ENST00000504846 648 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 FABP5P6-201ENST00000510588 409 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 AP003717.3-201ENST00000544832 1180 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 AC099778.2-201ENST00000610904 211 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 AC138649.5-201ENST00000637456 137 ntBASIC2.11□□□□□ -2.07
COL4A5P29400 RNU6-891P-201ENST00000384280 111 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 MIR1250-201ENST00000408098 113 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 AC004965.1-201ENST00000413033 213 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 FO393414.1-201ENST00000428697 1184 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 AL645568.3-201ENST00000433683 316 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 HIGD1AP11-201ENST00000438361 280 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.1□□□□□ -2.07
COL4A5P29400 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.1□□□□□ -2.07
COL4A5P29400 RN7SKP277-201ENST00000516895 283 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.1□□□□□ -2.07
COL4A5P29400 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.1□□□□□ -2.07
COL4A5P29400 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.1□□□□□ -2.07
COL4A5P29400 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.1□□□□□ -2.07
COL4A5P29400 MIR3199-1-201ENST00000582434 88 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
COL4A5P29400 APOOP1-201ENST00000604695 592 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 AL360085.1-201ENST00000604713 532 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 AL137246.1-201ENST00000607072 977 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 AC006023.2-201ENST00000609916 167 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 U6.48-201ENST00000618523 106 ntBASIC2.1□□□□□ -2.07
COL4A5P29400 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.1□□□□□ -2.07
COL4A5P29400 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.1□□□□□ -2.07
COL4A5P29400 SEPT7P7-201ENST00000420492 1301 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
COL4A5P29400 RPL31P2-201ENST00000413849 377 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.09□□□□□ -2.07
COL4A5P29400 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.09□□□□□ -2.07
COL4A5P29400 AL121578.1-201ENST00000428051 892 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 HMGB1P27-201ENST00000431429 603 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 RPS15AP17-201ENST00000470598 390 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 AC079804.2-201ENST00000490376 200 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.09□□□□□ -2.07
COL4A5P29400 ZNF192P1-203ENST00000565888 810 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 AC090751.1-201ENST00000566966 267 ntBASIC2.09□□□□□ -2.07
COL4A5P29400 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.09□□□□□ -2.07
COL4A5P29400 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.09□□□□□ -2.07
COL4A5P29400 AC092954.1-201ENST00000609121 445 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms