Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RXRBP28702 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
RXRBP28702 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RXRBP28702 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RXRBP28702 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RXRBP28702 ELL2P4-201ENST00000446870 1376 ntBASIC5.67□□□□□ -1.5
RXRBP28702 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RXRBP28702 AC073136.1-201ENST00000449426 2884 ntBASIC5.67□□□□□ -1.5
RXRBP28702 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
RXRBP28702 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.67□□□□□ -1.5
RXRBP28702 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RXRBP28702 OR1S2-201ENST00000302592 978 ntBASIC5.67□□□□□ -1.5
RXRBP28702 RNA5SP175-201ENST00000364275 119 ntBASIC5.67□□□□□ -1.5
RXRBP28702 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RXRBP28702 RNU6-317P-201ENST00000384031 107 ntBASIC5.67□□□□□ -1.5
RXRBP28702 U8.11-201ENST00000384699 133 ntBASIC5.67□□□□□ -1.5
RXRBP28702 U8.12-201ENST00000384701 133 ntBASIC5.67□□□□□ -1.5
RXRBP28702 MIR30B-201ENST00000384850 88 ntBASIC5.67□□□□□ -1.5
RXRBP28702 RPL21P17-201ENST00000397467 475 ntBASIC5.67□□□□□ -1.5
RXRBP28702 MIR1302-3-201ENST00000408128 138 ntBASIC5.67□□□□□ -1.5
RXRBP28702 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.67□□□□□ -1.5
RXRBP28702 GNG5P5-201ENST00000420444 220 ntBASIC5.67□□□□□ -1.5
RXRBP28702 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.67□□□□□ -1.5
RXRBP28702 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.67□□□□□ -1.5
RXRBP28702 ERLEC1P1-201ENST00000433806 578 ntBASIC5.67□□□□□ -1.5
RXRBP28702 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.67□□□□□ -1.5
RXRBP28702 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.67□□□□□ -1.5
RXRBP28702 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.67□□□□□ -1.5
RXRBP28702 U8.18-201ENST00000459285 133 ntBASIC5.67□□□□□ -1.5
RXRBP28702 RN7SL429P-201ENST00000479090 223 ntBASIC5.67□□□□□ -1.5
RXRBP28702 RN7SL489P-201ENST00000486185 223 ntBASIC5.67□□□□□ -1.5
RXRBP28702 RN7SL327P-201ENST00000488659 223 ntBASIC5.67□□□□□ -1.5
RXRBP28702 MTCO1P29-201ENST00000496868 288 ntBASIC5.67□□□□□ -1.5
RXRBP28702 FAM206BP-201ENST00000510179 541 ntBASIC5.67□□□□□ -1.5
RXRBP28702 AC026782.1-201ENST00000512952 449 ntBASIC5.67□□□□□ -1.5
RXRBP28702 AC093303.1-201ENST00000514549 295 ntBASIC5.67□□□□□ -1.5
RXRBP28702 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.67□□□□□ -1.5
RXRBP28702 RNA5SP73-201ENST00000516744 108 ntBASIC5.67□□□□□ -1.5
RXRBP28702 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.67□□□□□ -1.5
RXRBP28702 COX6B1P6-201ENST00000522347 255 ntBASIC5.67□□□□□ -1.5
RXRBP28702 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.67□□□□□ -1.5
RXRBP28702 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.67□□□□□ -1.5
RXRBP28702 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.67□□□□□ -1.5
RXRBP28702 SULT1C2P1-202ENST00000562418 459 ntBASIC5.67□□□□□ -1.5
RXRBP28702 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.67□□□□□ -1.5
RXRBP28702 AL022345.1-201ENST00000607292 135 ntBASIC5.67□□□□□ -1.5
RXRBP28702 uc_338.15-201ENST00000615470 191 ntBASIC5.67□□□□□ -1.5
RXRBP28702 RN7SL853P-201ENST00000617250 223 ntBASIC5.67□□□□□ -1.5
RXRBP28702 AP001642.1-201ENST00000624727 2117 ntBASIC5.67□□□□□ -1.5
RXRBP28702 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RXRBP28702 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RXRBP28702 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RXRBP28702 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RXRBP28702 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RXRBP28702 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RXRBP28702 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RXRBP28702 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.67□□□□□ -1.5
RXRBP28702 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RXRBP28702 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RXRBP28702 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
RXRBP28702 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RXRBP28702 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RXRBP28702 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RXRBP28702 THAP12P5-201ENST00000405864 2275 ntBASIC5.66□□□□□ -1.5
RXRBP28702 RPL23AP57-201ENST00000332361 466 ntBASIC5.66□□□□□ -1.5
RXRBP28702 AC073069.1-201ENST00000428657 441 ntBASIC5.66□□□□□ -1.5
RXRBP28702 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.66□□□□□ -1.5
RXRBP28702 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.66□□□□□ -1.5
RXRBP28702 AC002381.1-201ENST00000447049 280 ntBASIC5.66□□□□□ -1.5
RXRBP28702 NANOGP10-201ENST00000453325 895 ntBASIC5.66□□□□□ -1.5
RXRBP28702 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.66□□□□□ -1.5
RXRBP28702 BX510359.1-201ENST00000456973 237 ntBASIC5.66□□□□□ -1.5
RXRBP28702 RPL21P6-201ENST00000479171 504 ntBASIC5.66□□□□□ -1.5
RXRBP28702 AF213884.1-201ENST00000488102 463 ntBASIC5.66□□□□□ -1.5
RXRBP28702 SMURF2P1-201ENST00000514992 481 ntBASIC5.66□□□□□ -1.5
RXRBP28702 SCARNA24.1-201ENST00000516465 137 ntBASIC5.66□□□□□ -1.5
RXRBP28702 AC008562.1-201ENST00000521763 330 ntBASIC5.66□□□□□ -1.5
RXRBP28702 OR4R1P-201ENST00000529879 463 ntBASIC5.66□□□□□ -1.5
RXRBP28702 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.66□□□□□ -1.5
RXRBP28702 OR4T1P-201ENST00000554933 911 ntBASIC5.66□□□□□ -1.5
RXRBP28702 LARP7P2-201ENST00000575306 125 ntBASIC5.66□□□□□ -1.5
RXRBP28702 MIR5186-201ENST00000577504 120 ntBASIC5.66□□□□□ -1.5
RXRBP28702 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.66□□□□□ -1.5
RXRBP28702 AL109918.3-201ENST00000603072 338 ntBASIC5.66□□□□□ -1.5
RXRBP28702 AL592436.1-201ENST00000605135 558 ntBASIC5.66□□□□□ -1.5
RXRBP28702 AL021997.2-201ENST00000615674 271 ntBASIC5.66□□□□□ -1.5
RXRBP28702 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RXRBP28702 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.66□□□□□ -1.5
RXRBP28702 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RXRBP28702 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RXRBP28702 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
RXRBP28702 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RXRBP28702 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
RXRBP28702 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RXRBP28702 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.65□□□□□ -1.5
RXRBP28702 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RXRBP28702 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.65□□□□□ -1.5
RXRBP28702 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RXRBP28702 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RXRBP28702 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms