Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MYL12BP1-201ENST00000569826 507 ntBASIC2.58□□□□□ -2
TOP2AP11388 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
TOP2AP11388 RNU6-707P-201ENST00000364647 95 ntBASIC2.57□□□□□ -2
TOP2AP11388 RNU1-109P-201ENST00000383960 147 ntBASIC2.57□□□□□ -2
TOP2AP11388 SNRPEP2-201ENST00000397592 279 ntBASIC2.57□□□□□ -2
TOP2AP11388 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.57□□□□□ -2
TOP2AP11388 AL513185.2-201ENST00000425543 193 ntBASIC2.57□□□□□ -2
TOP2AP11388 SUMO1P4-201ENST00000429430 302 ntBASIC2.57□□□□□ -2
TOP2AP11388 PIGFP3-201ENST00000441918 722 ntBASIC2.57□□□□□ -2
TOP2AP11388 AC244505.5-201ENST00000443639 207 ntBASIC2.57□□□□□ -2
TOP2AP11388 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.57□□□□□ -2
TOP2AP11388 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.57□□□□□ -2
TOP2AP11388 AC104308.1-201ENST00000454621 333 ntBASIC2.57□□□□□ -2
TOP2AP11388 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.57□□□□□ -2
TOP2AP11388 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.57□□□□□ -2
TOP2AP11388 Y_RNA.670-201ENST00000516255 105 ntBASIC2.57□□□□□ -2
TOP2AP11388 RNU2-58P-201ENST00000516403 183 ntBASIC2.57□□□□□ -2
TOP2AP11388 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.57□□□□□ -2
TOP2AP11388 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.57□□□□□ -2
TOP2AP11388 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.57□□□□□ -2
TOP2AP11388 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.57□□□□□ -2
TOP2AP11388 AC010735.1-201ENST00000567305 1026 ntBASIC2.57□□□□□ -2
TOP2AP11388 MIR4448-201ENST00000584360 86 ntBASIC2.57□□□□□ -2
TOP2AP11388 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.57□□□□□ -2
TOP2AP11388 AL353770.2-201ENST00000620024 78 ntBASIC2.57□□□□□ -2
TOP2AP11388 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.56□□□□□ -2
TOP2AP11388 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.56□□□□□ -2
TOP2AP11388 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.56□□□□□ -2
TOP2AP11388 RPS29P20-201ENST00000489592 171 ntBASIC2.56□□□□□ -2
TOP2AP11388 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.56□□□□□ -2
TOP2AP11388 RNA5SP82-201ENST00000516707 92 ntBASIC2.56□□□□□ -2
TOP2AP11388 RNU1-92P-201ENST00000517017 135 ntBASIC2.56□□□□□ -2
TOP2AP11388 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.56□□□□□ -2
TOP2AP11388 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.55□□□□□ -2
TOP2AP11388 RNU6-1027P-201ENST00000383998 107 ntBASIC2.55□□□□□ -2
TOP2AP11388 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.55□□□□□ -2
TOP2AP11388 Z85995.1-201ENST00000415547 335 ntBASIC2.55□□□□□ -2
TOP2AP11388 TRIM60P18-201ENST00000441518 828 ntBASIC2.55□□□□□ -2
TOP2AP11388 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.55□□□□□ -2
TOP2AP11388 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.55□□□□□ -2
TOP2AP11388 AP002748.2-201ENST00000528671 348 ntBASIC2.55□□□□□ -2
TOP2AP11388 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.55□□□□□ -2
TOP2AP11388 YWHAQP7-201ENST00000603536 658 ntBASIC2.55□□□□□ -2
TOP2AP11388 SNHG22-203ENST00000617833 660 ntBASIC2.55□□□□□ -2
TOP2AP11388 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
TOP2AP11388 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.55□□□□□ -2
TOP2AP11388 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.54□□□□□ -2
TOP2AP11388 RNY1P14-201ENST00000384426 108 ntBASIC2.54□□□□□ -2
TOP2AP11388 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.54□□□□□ -2
TOP2AP11388 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.54□□□□□ -2
TOP2AP11388 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.54□□□□□ -2
TOP2AP11388 OR51B8P-201ENST00000449892 769 ntBASIC2.54□□□□□ -2
TOP2AP11388 AC004223.1-201ENST00000479840 271 ntBASIC2.54□□□□□ -2
TOP2AP11388 AL592494.3-201ENST00000609485 464 ntBASIC2.54□□□□□ -2
TOP2AP11388 RLIMP2-201ENST00000427891 1563 ntBASIC2.54□□□□□ -2
TOP2AP11388 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TOP2AP11388 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.54□□□□□ -2
TOP2AP11388 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
TOP2AP11388 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.53□□□□□ -2
TOP2AP11388 RPS15AP7-201ENST00000439294 405 ntBASIC2.53□□□□□ -2
TOP2AP11388 MOB1AP2-201ENST00000446060 614 ntBASIC2.53□□□□□ -2
TOP2AP11388 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.53□□□□□ -2
TOP2AP11388 uc_338.12-201ENST00000616344 181 ntBASIC2.53□□□□□ -2
TOP2AP11388 U8.1-201ENST00000362843 134 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP2AP11388 RPS15AP1-201ENST00000457423 391 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP2AP11388 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP2AP11388 AC131280.1-202ENST00000624067 4211 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 Y_RNA.191-201ENST00000363972 113 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 U3.15-201ENST00000365398 212 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 RNA5SP492-201ENST00000411330 114 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 USP9YP6-201ENST00000413550 854 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 USP9YP34-201ENST00000453983 808 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 AC012170.1-201ENST00000495139 359 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 MTCYBP18-201ENST00000501056 747 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 AC096571.1-202ENST00000506634 735 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 OR4V1P-201ENST00000525394 1140 ntBASIC2.52□□□□□ -2.01
TOP2AP11388 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP2AP11388 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.52□□□□□ -2.01
TOP2AP11388 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.52□□□□□ -2.01
TOP2AP11388 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.52□□□□□ -2.01
TOP2AP11388 AC245100.2-201ENST00000454544 1679 ntBASIC2.51□□□□□ -2.01
TOP2AP11388 AC114546.3-201ENST00000623582 1734 ntBASIC2.51□□□□□ -2.01
TOP2AP11388 MIR320A-201ENST00000385302 82 ntBASIC2.51□□□□□ -2.01
TOP2AP11388 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TOP2AP11388 AC009965.2-201ENST00000425328 970 ntBASIC2.51□□□□□ -2.01
TOP2AP11388 MTCO2P9-201ENST00000503214 694 ntBASIC2.51□□□□□ -2.01
TOP2AP11388 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.51□□□□□ -2.01
TOP2AP11388 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.51□□□□□ -2.01
TOP2AP11388 AC139103.1-201ENST00000534696 1030 ntBASIC2.51□□□□□ -2.01
TOP2AP11388 AC008015.1-201ENST00000555505 465 ntBASIC2.51□□□□□ -2.01
TOP2AP11388 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.5□□□□□ -2.01
TOP2AP11388 MIR96-201ENST00000362288 78 ntBASIC2.5□□□□□ -2.01
TOP2AP11388 AL357078.2-201ENST00000416486 427 ntBASIC2.5□□□□□ -2.01
TOP2AP11388 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.5□□□□□ -2.01
TOP2AP11388 AC012181.1-201ENST00000479895 423 ntBASIC2.5□□□□□ -2.01
TOP2AP11388 ACTR3BP3-201ENST00000565577 979 ntBASIC2.5□□□□□ -2.01
TOP2AP11388 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.5□□□□□ -2.01
TOP2AP11388 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms