Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.4□□□□□ -1.87
CD48P09326 USP9YP32-201ENST00000452432 430 ntBASIC3.4□□□□□ -1.87
CD48P09326 SNRPFP4-201ENST00000456366 242 ntBASIC3.4□□□□□ -1.87
CD48P09326 SUMO2P2-201ENST00000456482 255 ntBASIC3.4□□□□□ -1.87
CD48P09326 AC106872.3-201ENST00000495104 446 ntBASIC3.4□□□□□ -1.87
CD48P09326 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.4□□□□□ -1.87
CD48P09326 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.4□□□□□ -1.87
CD48P09326 RNU1-143P-201ENST00000516296 146 ntBASIC3.4□□□□□ -1.87
CD48P09326 COX6CP8-201ENST00000522620 226 ntBASIC3.4□□□□□ -1.87
CD48P09326 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.4□□□□□ -1.87
CD48P09326 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.4□□□□□ -1.87
CD48P09326 AC084757.1-201ENST00000559987 490 ntBASIC3.4□□□□□ -1.87
CD48P09326 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.4□□□□□ -1.87
CD48P09326 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.4□□□□□ -1.87
CD48P09326 MAGOH2P-202ENST00000584384 429 ntBASIC3.4□□□□□ -1.87
CD48P09326 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.4□□□□□ -1.87
CD48P09326 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.4□□□□□ -1.87
CD48P09326 AL159169.3-201ENST00000608871 561 ntBASIC3.4□□□□□ -1.87
CD48P09326 U1.23-201ENST00000610293 146 ntBASIC3.4□□□□□ -1.87
CD48P09326 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.4□□□□□ -1.87
CD48P09326 Z99129.1-201ENST00000612510 255 ntBASIC3.4□□□□□ -1.87
CD48P09326 RNU1-68P-201ENST00000615382 146 ntBASIC3.4□□□□□ -1.87
CD48P09326 AL355365.1-201ENST00000616480 294 ntBASIC3.4□□□□□ -1.87
CD48P09326 U1.39-201ENST00000621562 146 ntBASIC3.4□□□□□ -1.87
CD48P09326 AL445264.1-201ENST00000621719 171 ntBASIC3.4□□□□□ -1.87
CD48P09326 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.4□□□□□ -1.87
CD48P09326 FAM157B-203ENST00000639350 358 ntBASIC3.4□□□□□ -1.87
CD48P09326 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD48P09326 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CD48P09326 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CD48P09326 AC006378.2-201ENST00000623178 2476 ntBASIC3.39□□□□□ -1.87
CD48P09326 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD48P09326 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD48P09326 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD48P09326 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD48P09326 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD48P09326 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.39□□□□□ -1.87
CD48P09326 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD48P09326 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CD48P09326 AL356473.1-201ENST00000406203 1408 ntBASIC3.39□□□□□ -1.87
CD48P09326 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD48P09326 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CD48P09326 RPL7P26-201ENST00000333817 754 ntBASIC3.39□□□□□ -1.87
CD48P09326 Y_RNA.359-201ENST00000365498 102 ntBASIC3.39□□□□□ -1.87
CD48P09326 MIR200C-201ENST00000384980 68 ntBASIC3.39□□□□□ -1.87
CD48P09326 PTMAP5-201ENST00000393073 333 ntBASIC3.39□□□□□ -1.87
CD48P09326 MIR320C1-201ENST00000408566 88 ntBASIC3.39□□□□□ -1.87
CD48P09326 RNA5SP44-201ENST00000410446 133 ntBASIC3.39□□□□□ -1.87
CD48P09326 Y_RNA.619-201ENST00000410951 90 ntBASIC3.39□□□□□ -1.87
CD48P09326 RNA5SP107-201ENST00000411358 122 ntBASIC3.39□□□□□ -1.87
CD48P09326 HMGN1P24-201ENST00000412282 298 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC012065.2-201ENST00000421295 375 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC069157.1-201ENST00000421749 137 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.39□□□□□ -1.87
CD48P09326 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.39□□□□□ -1.87
CD48P09326 CST9LP2-201ENST00000437612 320 ntBASIC3.39□□□□□ -1.87
CD48P09326 CYCSP43-201ENST00000438233 310 ntBASIC3.39□□□□□ -1.87
CD48P09326 LSM1P1-201ENST00000438629 273 ntBASIC3.39□□□□□ -1.87
CD48P09326 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.39□□□□□ -1.87
CD48P09326 PDSS1P2-201ENST00000449397 678 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.39□□□□□ -1.87
CD48P09326 SNORD42A-201ENST00000459584 64 ntBASIC3.39□□□□□ -1.87
CD48P09326 RPS4XP10-201ENST00000465034 731 ntBASIC3.39□□□□□ -1.87
CD48P09326 AP002884.2-201ENST00000471647 395 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.39□□□□□ -1.87
CD48P09326 AC092185.1-201ENST00000491371 97 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.39□□□□□ -1.87
CD48P09326 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.39□□□□□ -1.87
CD48P09326 CDC42P4-201ENST00000510507 563 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.39□□□□□ -1.87
CD48P09326 APOOP4-201ENST00000513530 597 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC016065.2-201ENST00000514530 444 ntBASIC3.39□□□□□ -1.87
CD48P09326 RNU6-405P-201ENST00000516637 110 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC025881.1-201ENST00000518851 512 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC022790.1-201ENST00000522872 204 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.39□□□□□ -1.87
CD48P09326 CCNG2P1-201ENST00000549521 1000 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.39□□□□□ -1.87
CD48P09326 MIR4444-1-201ENST00000581696 74 ntBASIC3.39□□□□□ -1.87
CD48P09326 AP001180.3-201ENST00000582221 145 ntBASIC3.39□□□□□ -1.87
CD48P09326 MIR544B-201ENST00000582372 78 ntBASIC3.39□□□□□ -1.87
CD48P09326 MIR4307-201ENST00000582802 84 ntBASIC3.39□□□□□ -1.87
CD48P09326 MIR4444-2-201ENST00000584390 74 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC024220.1-201ENST00000603675 484 ntBASIC3.39□□□□□ -1.87
CD48P09326 BCRP9-201ENST00000605312 388 ntBASIC3.39□□□□□ -1.87
CD48P09326 NDUFA8P1-201ENST00000605525 367 ntBASIC3.39□□□□□ -1.87
CD48P09326 AL021997.1-201ENST00000605757 193 ntBASIC3.39□□□□□ -1.87
CD48P09326 AC090186.1-201ENST00000605991 572 ntBASIC3.39□□□□□ -1.87
CD48P09326 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.39□□□□□ -1.87
CD48P09326 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.39□□□□□ -1.87
CD48P09326 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.39□□□□□ -1.87
CD48P09326 AL603839.4-201ENST00000624658 1005 ntBASIC3.39□□□□□ -1.87
CD48P09326 CYP3A51P-201ENST00000633513 256 ntBASIC3.39□□□□□ -1.87
CD48P09326 TEX21P-201ENST00000447107 1476 ntBASIC3.39□□□□□ -1.87
CD48P09326 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.39□□□□□ -1.87
CD48P09326 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.39□□□□□ -1.87
CD48P09326 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CD48P09326 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD48P09326 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CD48P09326 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms