Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC104564.1-201ENST00000493028 407 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 ARL4AP2-201ENST00000507378 601 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 RN7SKP277-201ENST00000516895 283 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.26□□□□□ -2.05
COL1A1P02452 YWHAQP7-201ENST00000603536 658 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 AC090525.3-201ENST00000605601 189 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 AC011472.4-201ENST00000615848 491 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 MIR6864-201ENST00000617935 70 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 AC091953.2-201ENST00000623979 160 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL1A1P02452 Z82195.2-201ENST00000612348 18351 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.25□□□□□ -2.05
COL1A1P02452 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL1A1P02452 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL1A1P02452 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
COL1A1P02452 U8.10-201ENST00000384260 133 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 AL627390.1-201ENST00000396055 340 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 RNA5SP270-201ENST00000411361 118 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.25□□□□□ -2.05
COL1A1P02452 MTND1P23-201ENST00000416931 372 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 BTF3P4-201ENST00000418852 495 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 MTCYBP12-201ENST00000440559 1134 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 Z99714.1-201ENST00000450463 807 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 AL163540.1-201ENST00000485382 386 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 AC011352.3-201ENST00000505162 593 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.25□□□□□ -2.05
COL1A1P02452 TRMT112P2-201ENST00000512910 132 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 RNU4-18P-201ENST00000516751 149 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.25□□□□□ -2.05
COL1A1P02452 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.25□□□□□ -2.05
COL1A1P02452 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.25□□□□□ -2.05
COL1A1P02452 MTCO3P24-201ENST00000572729 782 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 AC002984.1-201ENST00000591692 448 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.25□□□□□ -2.05
COL1A1P02452 AL121917.1-203ENST00000605534 577 ntBASIC2.25□□□□□ -2.05
COL1A1P02452 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.25□□□□□ -2.05
COL1A1P02452 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.25□□□□□ -2.05
COL1A1P02452 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COL1A1P02452 VTRNA1-1-201ENST00000363120 99 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 RNA5SP391-201ENST00000363456 119 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 RFESDP1-201ENST00000422350 461 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.24□□□□□ -2.05
COL1A1P02452 PSMA2P3-201ENST00000429685 675 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.24□□□□□ -2.05
COL1A1P02452 RPL23AP20-201ENST00000447965 421 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 AC104472.2-201ENST00000469035 601 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.24□□□□□ -2.05
COL1A1P02452 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.24□□□□□ -2.05
COL1A1P02452 MLLT10P2-201ENST00000506434 249 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 FABP5P6-201ENST00000510588 409 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 RNU6-711P-201ENST00000517255 106 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.24□□□□□ -2.05
COL1A1P02452 MTCYBP41-201ENST00000528913 1123 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 AC011611.5-201ENST00000552477 578 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 AL390240.1-201ENST00000612950 384 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 FAM157B-203ENST00000639350 358 ntBASIC2.24□□□□□ -2.05
COL1A1P02452 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
COL1A1P02452 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
COL1A1P02452 AP001350.1-201ENST00000601906 1524 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL1A1P02452 SNORA67.5-201ENST00000391036 107 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL1A1P02452 MIR1294-201ENST00000408503 142 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 AL513331.1-201ENST00000411908 397 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.23□□□□□ -2.05
COL1A1P02452 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.23□□□□□ -2.05
COL1A1P02452 EIF1AXP1-201ENST00000419267 435 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL1A1P02452 AL590664.1-201ENST00000448065 339 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.23□□□□□ -2.05
COL1A1P02452 HMGB1P38-201ENST00000490557 577 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 AC107393.1-201ENST00000512403 346 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 SNORA25.15-201ENST00000516487 89 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 RNU6-250P-201ENST00000516958 103 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 RNU6-1073P-201ENST00000517182 106 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.23□□□□□ -2.05
COL1A1P02452 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.23□□□□□ -2.05
COL1A1P02452 SNORA4-201ENST00000584302 138 ntBASIC2.23□□□□□ -2.05
COL1A1P02452 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.23□□□□□ -2.05
COL1A1P02452 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
COL1A1P02452 Y_RNA.112-201ENST00000363250 102 ntBASIC2.22□□□□□ -2.05
COL1A1P02452 RNA5SP138-201ENST00000365098 114 ntBASIC2.22□□□□□ -2.05
COL1A1P02452 RNU4-65P-201ENST00000410473 140 ntBASIC2.22□□□□□ -2.05
COL1A1P02452 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.22□□□□□ -2.05
COL1A1P02452 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.22□□□□□ -2.05
COL1A1P02452 MOB1AP2-201ENST00000446060 614 ntBASIC2.22□□□□□ -2.05
COL1A1P02452 AL031659.1-201ENST00000447075 539 ntBASIC2.22□□□□□ -2.05
COL1A1P02452 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
COL1A1P02452 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL1A1P02452 MTCO3P35-201ENST00000485582 781 ntBASIC2.22□□□□□ -2.05
COL1A1P02452 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.22□□□□□ -2.05
COL1A1P02452 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL1A1P02452 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.22□□□□□ -2.05
COL1A1P02452 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.22□□□□□ -2.05
COL1A1P02452 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.22□□□□□ -2.05
COL1A1P02452 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL1A1P02452 AC073055.1-201ENST00000456901 1621 ntBASIC2.22□□□□□ -2.05
COL1A1P02452 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
COL1A1P02452 RNU6-661P-201ENST00000362409 107 ntBASIC2.21□□□□□ -2.06
COL1A1P02452 RNU6-335P-201ENST00000364563 113 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms