Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AL357080.1-201ENST00000617394 239 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AL390862.1-201ENST00000635467 1469 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DQA1P01909 AC006378.2-201ENST00000623178 2476 ntBASIC2.24□□□□□ -2.05
HLA-DQA1P01909 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC106754.1-201ENST00000562632 1513 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 Y_RNA.234-201ENST00000364409 97 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 ATP5F1P3-201ENST00000397213 657 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 RPL7P25-201ENST00000404151 721 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 RNU6-1077P-201ENST00000410506 102 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 RN7SKP27-201ENST00000410684 333 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC106883.1-201ENST00000418805 562 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC013410.2-201ENST00000422627 201 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 ZYG11AP1-201ENST00000430329 837 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 OR4K11P-201ENST00000431829 904 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 SNRPEP4-201ENST00000435815 279 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 ARPC3P5-201ENST00000448802 534 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 MTND1P31-201ENST00000449206 961 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC087190.1-201ENST00000484462 480 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 HMGB1P36-201ENST00000487709 576 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 VN1R104P-201ENST00000505115 1009 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC109445.1-201ENST00000512356 383 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 RNU6-528P-201ENST00000516926 100 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 RNU6-714P-201ENST00000516963 103 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 IGKV2-26-201ENST00000518305 343 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 MIR2682-201ENST00000580305 110 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AP001429.1-201ENST00000602568 530 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 BBIP1P1-201ENST00000602999 279 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC008739.3-201ENST00000603262 127 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AP000787.2-201ENST00000604432 568 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC090115.4-201ENST00000609970 188 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 DUXAP10-204ENST00000612052 616 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC084757.4-201ENST00000616350 526 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.23□□□□□ -2.05
HLA-DQA1P01909 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DQA1P01909 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DQA1P01909 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HLA-DQA1P01909 AL161912.2-201ENST00000565707 3007 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HLA-DQA1P01909 RNU1-35P-201ENST00000362782 153 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 VTRNA1-1-201ENST00000363120 99 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 RNU4-92P-201ENST00000363783 136 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 RNU6-289P-201ENST00000364093 107 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 RNU6-906P-201ENST00000384700 70 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 MIR7-3-201ENST00000384898 110 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 RPL21P75-201ENST00000396599 483 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 TAF9BP1-201ENST00000396646 746 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 RPL21P28-201ENST00000401418 483 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 AL592114.1-201ENST00000403842 483 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 RNA5SP38-201ENST00000410750 119 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 RPL7P10-201ENST00000417407 739 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 AL953862.1-201ENST00000423016 168 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.22□□□□□ -2.05
HLA-DQA1P01909 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DQA1P01909 RPS25P9-201ENST00000435591 252 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DQA1P01909 COX7BP2-201ENST00000437976 242 ntBASIC2.22□□□□□ -2.05
HLA-DQA1P01909 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DQA1P01909 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
HLA-DQA1P01909 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DQA1P01909 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DQA1P01909 RPL21P39-201ENST00000463605 483 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms