Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TNFP01375 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TNFP01375 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TNFP01375 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TNFP01375 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TNFP01375 MIR524-201ENST00000385242 87 ntBASIC1.89□□□□□ -2.11
TNFP01375 RNU6-244P-201ENST00000391028 104 ntBASIC1.89□□□□□ -2.11
TNFP01375 Z75741.2-201ENST00000417272 1167 ntBASIC1.89□□□□□ -2.11
TNFP01375 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.89□□□□□ -2.11
TNFP01375 HMGB1P48-201ENST00000446155 598 ntBASIC1.89□□□□□ -2.11
TNFP01375 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.89□□□□□ -2.11
TNFP01375 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.89□□□□□ -2.11
TNFP01375 MRPL42P6-201ENST00000486397 371 ntBASIC1.89□□□□□ -2.11
TNFP01375 MTAPP1-201ENST00000489154 819 ntBASIC1.89□□□□□ -2.11
TNFP01375 AC117522.2-201ENST00000510049 657 ntBASIC1.89□□□□□ -2.11
TNFP01375 AC113155.1-201ENST00000511141 769 ntBASIC1.89□□□□□ -2.11
TNFP01375 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.89□□□□□ -2.11
TNFP01375 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.89□□□□□ -2.11
TNFP01375 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.89□□□□□ -2.11
TNFP01375 AC092474.3-201ENST00000603022 568 ntBASIC1.89□□□□□ -2.11
TNFP01375 RPAP2P1-201ENST00000603626 1168 ntBASIC1.89□□□□□ -2.11
TNFP01375 MIR6845-201ENST00000613182 61 ntBASIC1.89□□□□□ -2.11
TNFP01375 VN1R74P-201ENST00000613259 503 ntBASIC1.89□□□□□ -2.11
TNFP01375 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.89□□□□□ -2.11
TNFP01375 AC095031.1-201ENST00000623685 672 ntBASIC1.89□□□□□ -2.11
TNFP01375 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.89□□□□□ -2.11
TNFP01375 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.89□□□□□ -2.11
TNFP01375 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TNFP01375 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TNFP01375 ZNF519P1-201ENST00000449011 1626 ntBASIC1.88□□□□□ -2.11
TNFP01375 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TNFP01375 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
TNFP01375 RPL26P37-201ENST00000411983 438 ntBASIC1.88□□□□□ -2.11
TNFP01375 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.88□□□□□ -2.11
TNFP01375 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.88□□□□□ -2.11
TNFP01375 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.88□□□□□ -2.11
TNFP01375 AL121871.1-201ENST00000443413 436 ntBASIC1.88□□□□□ -2.11
TNFP01375 AL590664.1-201ENST00000448065 339 ntBASIC1.88□□□□□ -2.11
TNFP01375 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.88□□□□□ -2.11
TNFP01375 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.88□□□□□ -2.11
TNFP01375 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.88□□□□□ -2.11
TNFP01375 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.88□□□□□ -2.11
TNFP01375 AC114322.1-201ENST00000506771 926 ntBASIC1.88□□□□□ -2.11
TNFP01375 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.88□□□□□ -2.11
TNFP01375 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.88□□□□□ -2.11
TNFP01375 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.88□□□□□ -2.11
TNFP01375 AMZ2P1-203ENST00000565833 850 ntBASIC1.88□□□□□ -2.11
TNFP01375 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.88□□□□□ -2.11
TNFP01375 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
TNFP01375 AL353997.5-201ENST00000618886 171 ntBASIC1.88□□□□□ -2.11
TNFP01375 AC079597.1-201ENST00000624306 508 ntBASIC1.88□□□□□ -2.11
TNFP01375 AC099063.3-201ENST00000642066 185 ntBASIC1.88□□□□□ -2.11
TNFP01375 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TNFP01375 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TNFP01375 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TNFP01375 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TNFP01375 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.87□□□□□ -2.11
TNFP01375 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.87□□□□□ -2.11
TNFP01375 RNU6-482P-201ENST00000391068 107 ntBASIC1.87□□□□□ -2.11
TNFP01375 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TNFP01375 RPL21P32-201ENST00000419877 477 ntBASIC1.87□□□□□ -2.11
TNFP01375 WARS2P1-201ENST00000429678 537 ntBASIC1.87□□□□□ -2.11
TNFP01375 ZYG11AP1-201ENST00000430329 837 ntBASIC1.87□□□□□ -2.11
TNFP01375 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.87□□□□□ -2.11
TNFP01375 MED6P1-201ENST00000439659 713 ntBASIC1.87□□□□□ -2.11
TNFP01375 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.87□□□□□ -2.11
TNFP01375 CBWD4P-201ENST00000445695 655 ntBASIC1.87□□□□□ -2.11
TNFP01375 HMGN2P23-201ENST00000456759 269 ntBASIC1.87□□□□□ -2.11
TNFP01375 snoU13.7-201ENST00000459220 104 ntBASIC1.87□□□□□ -2.11
TNFP01375 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
TNFP01375 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.87□□□□□ -2.11
TNFP01375 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.87□□□□□ -2.11
TNFP01375 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.87□□□□□ -2.11
TNFP01375 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.87□□□□□ -2.11
TNFP01375 FAM92A1P1-201ENST00000528023 890 ntBASIC1.87□□□□□ -2.11
TNFP01375 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.87□□□□□ -2.11
TNFP01375 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.87□□□□□ -2.11
TNFP01375 AL136363.1-201ENST00000605349 337 ntBASIC1.87□□□□□ -2.11
TNFP01375 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TNFP01375 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
TNFP01375 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
TNFP01375 AC110079.1-202ENST00000635213 138 ntBASIC1.87□□□□□ -2.11
TNFP01375 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.87□□□□□ -2.11
TNFP01375 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TNFP01375 ZNF72P-201ENST00000425869 1908 ntBASIC1.86□□□□□ -2.11
TNFP01375 AL049737.1-201ENST00000413920 1403 ntBASIC1.86□□□□□ -2.11
TNFP01375 RNU6-1293P-201ENST00000384077 107 ntBASIC1.86□□□□□ -2.11
TNFP01375 RPS4XP3-201ENST00000398541 413 ntBASIC1.86□□□□□ -2.11
TNFP01375 RNU2-20P-201ENST00000410425 191 ntBASIC1.86□□□□□ -2.11
TNFP01375 AC008173.1-201ENST00000418901 264 ntBASIC1.86□□□□□ -2.11
TNFP01375 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.86□□□□□ -2.11
TNFP01375 PGBD4P3-201ENST00000440731 581 ntBASIC1.86□□□□□ -2.11
TNFP01375 RPL23AP7-203ENST00000449021 469 ntBASIC1.86□□□□□ -2.11
TNFP01375 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TNFP01375 AC079804.2-201ENST00000490376 200 ntBASIC1.86□□□□□ -2.11
TNFP01375 AC104564.1-201ENST00000493028 407 ntBASIC1.86□□□□□ -2.11
TNFP01375 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.86□□□□□ -2.11
TNFP01375 AC107954.1-201ENST00000565906 727 ntBASIC1.86□□□□□ -2.11
TNFP01375 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.86□□□□□ -2.11
TNFP01375 MIR4658-201ENST00000584344 65 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms