Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MIR7-3-201ENST00000384898 110 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN3O95197 HSFY4P-201ENST00000415994 1181 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC017079.2-201ENST00000416102 485 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.82□□□□□ -1.8
RTN3O95197 Z99497.1-201ENST00000421282 135 ntBASIC3.82□□□□□ -1.8
RTN3O95197 PPP1R11P2-201ENST00000423543 382 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.82□□□□□ -1.8
RTN3O95197 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.82□□□□□ -1.8
RTN3O95197 CYCSP4-201ENST00000429682 331 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC109583.1-201ENST00000432156 268 ntBASIC3.82□□□□□ -1.8
RTN3O95197 HMGN2P31-201ENST00000432430 273 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN3O95197 RPL37P21-201ENST00000435890 276 ntBASIC3.82□□□□□ -1.8
RTN3O95197 RPL35AP22-201ENST00000436855 335 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.82□□□□□ -1.8
RTN3O95197 AL592447.1-201ENST00000447592 540 ntBASIC3.82□□□□□ -1.8
RTN3O95197 RPS23P3-201ENST00000470993 430 ntBASIC3.82□□□□□ -1.8
RTN3O95197 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN3O95197 RPS3AP50-201ENST00000487064 803 ntBASIC3.82□□□□□ -1.8
RTN3O95197 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.82□□□□□ -1.8
RTN3O95197 DUXAP2-201ENST00000519198 589 ntBASIC3.82□□□□□ -1.8
RTN3O95197 ERHP1-201ENST00000523006 310 ntBASIC3.82□□□□□ -1.8
RTN3O95197 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN3O95197 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.82□□□□□ -1.8
RTN3O95197 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.82□□□□□ -1.8
RTN3O95197 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN3O95197 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.82□□□□□ -1.8
RTN3O95197 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN3O95197 AP005205.1-201ENST00000563503 508 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC135628.1-201ENST00000568867 534 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN3O95197 AC105224.1-201ENST00000587055 421 ntBASIC3.82□□□□□ -1.8
RTN3O95197 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.82□□□□□ -1.8
RTN3O95197 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN3O95197 AC025811.1-201ENST00000604312 472 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC106900.2-201ENST00000604994 317 ntBASIC3.82□□□□□ -1.8
RTN3O95197 BRDTP1-201ENST00000605735 677 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AC004067.1-201ENST00000608733 700 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.82□□□□□ -1.8
RTN3O95197 AC078883.4-201ENST00000623218 367 ntBASIC3.82□□□□□ -1.8
RTN3O95197 AL732618.1-201ENST00000623251 301 ntBASIC3.82□□□□□ -1.8
RTN3O95197 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RTN3O95197 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTN3O95197 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RTN3O95197 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTN3O95197 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTN3O95197 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTN3O95197 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RTN3O95197 SNORD46.1-201ENST00000364139 104 ntBASIC3.81□□□□□ -1.8
RTN3O95197 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RTN3O95197 MIR218-2-201ENST00000385006 110 ntBASIC3.81□□□□□ -1.8
RTN3O95197 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.81□□□□□ -1.8
RTN3O95197 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.81□□□□□ -1.8
RTN3O95197 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.81□□□□□ -1.8
RTN3O95197 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.81□□□□□ -1.8
RTN3O95197 AC233728.2-201ENST00000425348 757 ntBASIC3.81□□□□□ -1.8
RTN3O95197 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.81□□□□□ -1.8
RTN3O95197 AL365184.2-201ENST00000431139 435 ntBASIC3.81□□□□□ -1.8
RTN3O95197 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.81□□□□□ -1.8
RTN3O95197 LARP1BP3-201ENST00000437229 869 ntBASIC3.81□□□□□ -1.8
RTN3O95197 AL512286.1-201ENST00000439244 400 ntBASIC3.81□□□□□ -1.8
RTN3O95197 MTND1P26-201ENST00000440488 538 ntBASIC3.81□□□□□ -1.8
RTN3O95197 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.81□□□□□ -1.8
RTN3O95197 AC097262.1-201ENST00000452559 548 ntBASIC3.81□□□□□ -1.8
RTN3O95197 ZNF114P1-201ENST00000453500 292 ntBASIC3.81□□□□□ -1.8
RTN3O95197 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.81□□□□□ -1.8
RTN3O95197 AC110768.1-201ENST00000509222 400 ntBASIC3.81□□□□□ -1.8
RTN3O95197 RNU6-798P-201ENST00000516912 103 ntBASIC3.81□□□□□ -1.8
RTN3O95197 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.81□□□□□ -1.8
RTN3O95197 AC008489.1-201ENST00000524271 483 ntBASIC3.81□□□□□ -1.8
RTN3O95197 AP001804.3-201ENST00000525146 880 ntBASIC3.81□□□□□ -1.8
RTN3O95197 AC007834.2-201ENST00000536310 343 ntBASIC3.81□□□□□ -1.8
RTN3O95197 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.81□□□□□ -1.8
RTN3O95197 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.81□□□□□ -1.8
RTN3O95197 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.81□□□□□ -1.8
RTN3O95197 AC055876.1-202ENST00000567053 138 ntBASIC3.81□□□□□ -1.8
RTN3O95197 MIR3921-201ENST00000577308 85 ntBASIC3.81□□□□□ -1.8
RTN3O95197 TPMTP1-201ENST00000592307 737 ntBASIC3.81□□□□□ -1.8
RTN3O95197 MIR7851-201ENST00000610611 160 ntBASIC3.81□□□□□ -1.8
RTN3O95197 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.81□□□□□ -1.8
RTN3O95197 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.81□□□□□ -1.8
RTN3O95197 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.81□□□□□ -1.8
RTN3O95197 SRP72P2-201ENST00000344851 1979 ntBASIC3.81□□□□□ -1.8
RTN3O95197 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTN3O95197 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTN3O95197 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTN3O95197 DDX10P1-201ENST00000448545 1933 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AL445523.1-201ENST00000451184 1362 ntBASIC3.8□□□□□ -1.8
RTN3O95197 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RTN3O95197 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTN3O95197 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RTN3O95197 RNA5SP295-201ENST00000362655 121 ntBASIC3.8□□□□□ -1.8
RTN3O95197 RNU5E-8P-201ENST00000363502 116 ntBASIC3.8□□□□□ -1.8
RTN3O95197 RNU6-525P-201ENST00000363685 104 ntBASIC3.8□□□□□ -1.8
RTN3O95197 RNY3P9-201ENST00000384727 106 ntBASIC3.8□□□□□ -1.8
RTN3O95197 RNU6-754P-201ENST00000391166 107 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AL591034.1-201ENST00000407447 340 ntBASIC3.8□□□□□ -1.8
RTN3O95197 RPL21P109-201ENST00000422213 475 ntBASIC3.8□□□□□ -1.8
RTN3O95197 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms