Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
SEMA3DO95025 RNU6-707P-201ENST00000364647 95 ntBASIC2.57□□□□□ -2
SEMA3DO95025 RNU1-100P-201ENST00000365255 165 ntBASIC2.57□□□□□ -2
SEMA3DO95025 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.57□□□□□ -2
SEMA3DO95025 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.57□□□□□ -2
SEMA3DO95025 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.57□□□□□ -2
SEMA3DO95025 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.57□□□□□ -2
SEMA3DO95025 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.57□□□□□ -2
SEMA3DO95025 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.57□□□□□ -2
SEMA3DO95025 AC107083.1-201ENST00000439643 279 ntBASIC2.57□□□□□ -2
SEMA3DO95025 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.57□□□□□ -2
SEMA3DO95025 MRPL50P4-201ENST00000446432 475 ntBASIC2.57□□□□□ -2
SEMA3DO95025 KC877373.1-201ENST00000479066 408 ntBASIC2.57□□□□□ -2
SEMA3DO95025 OR4G11P-201ENST00000492842 939 ntBASIC2.57□□□□□ -2
SEMA3DO95025 BOLA3P3-201ENST00000505182 232 ntBASIC2.57□□□□□ -2
SEMA3DO95025 AC008837.1-201ENST00000511513 412 ntBASIC2.57□□□□□ -2
SEMA3DO95025 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.57□□□□□ -2
SEMA3DO95025 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.57□□□□□ -2
SEMA3DO95025 AC087897.1-201ENST00000550134 156 ntBASIC2.57□□□□□ -2
SEMA3DO95025 MTCYBP27-201ENST00000555160 670 ntBASIC2.57□□□□□ -2
SEMA3DO95025 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.57□□□□□ -2
SEMA3DO95025 AP005205.1-201ENST00000563503 508 ntBASIC2.57□□□□□ -2
SEMA3DO95025 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.57□□□□□ -2
SEMA3DO95025 AC055876.5-201ENST00000605667 259 ntBASIC2.57□□□□□ -2
SEMA3DO95025 AP001521.1-201ENST00000609150 300 ntBASIC2.57□□□□□ -2
SEMA3DO95025 AL592148.2-201ENST00000612210 372 ntBASIC2.57□□□□□ -2
SEMA3DO95025 CYP3A51P-201ENST00000633513 256 ntBASIC2.57□□□□□ -2
SEMA3DO95025 AC087821.2-201ENST00000637086 450 ntBASIC2.57□□□□□ -2
SEMA3DO95025 ZNF663P-202ENST00000641770 1131 ntBASIC2.57□□□□□ -2
SEMA3DO95025 GDI2P1-201ENST00000429312 1336 ntBASIC2.57□□□□□ -2
SEMA3DO95025 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SEMA3DO95025 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.57□□□□□ -2
SEMA3DO95025 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.57□□□□□ -2
SEMA3DO95025 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SEMA3DO95025 RNA5SP387-201ENST00000364226 106 ntBASIC2.56□□□□□ -2
SEMA3DO95025 Y_RNA.333-201ENST00000365274 102 ntBASIC2.56□□□□□ -2
SEMA3DO95025 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
SEMA3DO95025 SUGT1P1-201ENST00000379514 476 ntBASIC2.56□□□□□ -2
SEMA3DO95025 AL035405.1-201ENST00000400795 710 ntBASIC2.56□□□□□ -2
SEMA3DO95025 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.56□□□□□ -2
SEMA3DO95025 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.56□□□□□ -2
SEMA3DO95025 RPS7P9-201ENST00000414704 586 ntBASIC2.56□□□□□ -2
SEMA3DO95025 LUZP4P1-201ENST00000415420 344 ntBASIC2.56□□□□□ -2
SEMA3DO95025 SEPT7P5-201ENST00000434048 306 ntBASIC2.56□□□□□ -2
SEMA3DO95025 MTND4LP10-201ENST00000435146 291 ntBASIC2.56□□□□□ -2
SEMA3DO95025 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.56□□□□□ -2
SEMA3DO95025 VN1R10P-201ENST00000447106 875 ntBASIC2.56□□□□□ -2
SEMA3DO95025 AC092757.1-201ENST00000467293 467 ntBASIC2.56□□□□□ -2
SEMA3DO95025 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.56□□□□□ -2
SEMA3DO95025 AC016550.1-201ENST00000505348 785 ntBASIC2.56□□□□□ -2
SEMA3DO95025 MLLT10P2-201ENST00000506434 249 ntBASIC2.56□□□□□ -2
SEMA3DO95025 AC006390.1-201ENST00000508068 283 ntBASIC2.56□□□□□ -2
SEMA3DO95025 RNA5SP367-201ENST00000516557 118 ntBASIC2.56□□□□□ -2
SEMA3DO95025 AC090136.1-201ENST00000520009 240 ntBASIC2.56□□□□□ -2
SEMA3DO95025 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.56□□□□□ -2
SEMA3DO95025 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.56□□□□□ -2
SEMA3DO95025 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.56□□□□□ -2
SEMA3DO95025 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.56□□□□□ -2
SEMA3DO95025 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.56□□□□□ -2
SEMA3DO95025 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.56□□□□□ -2
SEMA3DO95025 AC009163.5-201ENST00000575421 637 ntBASIC2.56□□□□□ -2
SEMA3DO95025 AC008739.2-201ENST00000597006 317 ntBASIC2.56□□□□□ -2
SEMA3DO95025 AC068620.3-201ENST00000602749 560 ntBASIC2.56□□□□□ -2
SEMA3DO95025 AC124016.2-201ENST00000610058 665 ntBASIC2.56□□□□□ -2
SEMA3DO95025 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.56□□□□□ -2
SEMA3DO95025 AL353748.2-201ENST00000622148 471 ntBASIC2.56□□□□□ -2
SEMA3DO95025 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.56□□□□□ -2
SEMA3DO95025 AC109315.1-201ENST00000584143 1347 ntBASIC2.56□□□□□ -2
SEMA3DO95025 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
SEMA3DO95025 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.55□□□□□ -2
SEMA3DO95025 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
SEMA3DO95025 MIR483-201ENST00000385070 76 ntBASIC2.55□□□□□ -2
SEMA3DO95025 SNORD65.1-201ENST00000390889 71 ntBASIC2.55□□□□□ -2
SEMA3DO95025 RNU2-15P-201ENST00000410692 191 ntBASIC2.55□□□□□ -2
SEMA3DO95025 TMEM167AP1-201ENST00000423409 219 ntBASIC2.55□□□□□ -2
SEMA3DO95025 ZNF833P-201ENST00000424938 1494 ntBASIC2.55□□□□□ -2
SEMA3DO95025 AC092427.1-202ENST00000430569 476 ntBASIC2.55□□□□□ -2
SEMA3DO95025 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.55□□□□□ -2
SEMA3DO95025 AC105272.1-201ENST00000438604 198 ntBASIC2.55□□□□□ -2
SEMA3DO95025 CYCSP32-201ENST00000440548 321 ntBASIC2.55□□□□□ -2
SEMA3DO95025 RPL37P25-201ENST00000507308 276 ntBASIC2.55□□□□□ -2
SEMA3DO95025 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.55□□□□□ -2
SEMA3DO95025 MTCO1P47-201ENST00000523889 1271 ntBASIC2.55□□□□□ -2
SEMA3DO95025 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.55□□□□□ -2
SEMA3DO95025 NDUFS5P6-201ENST00000529136 295 ntBASIC2.55□□□□□ -2
SEMA3DO95025 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.55□□□□□ -2
SEMA3DO95025 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.55□□□□□ -2
SEMA3DO95025 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.55□□□□□ -2
SEMA3DO95025 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.55□□□□□ -2
SEMA3DO95025 AC138915.2-201ENST00000569776 97 ntBASIC2.55□□□□□ -2
SEMA3DO95025 FAM60BP-201ENST00000578364 658 ntBASIC2.55□□□□□ -2
SEMA3DO95025 MIR5708-201ENST00000579723 85 ntBASIC2.55□□□□□ -2
SEMA3DO95025 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
SEMA3DO95025 MIR4635-201ENST00000583759 79 ntBASIC2.55□□□□□ -2
SEMA3DO95025 AL451007.1-201ENST00000595491 289 ntBASIC2.55□□□□□ -2
SEMA3DO95025 AL161756.2-201ENST00000604597 246 ntBASIC2.55□□□□□ -2
SEMA3DO95025 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.55□□□□□ -2
SEMA3DO95025 AL157770.1-201ENST00000623049 439 ntBASIC2.55□□□□□ -2
SEMA3DO95025 AP001002.2-201ENST00000625137 386 ntBASIC2.55□□□□□ -2
SEMA3DO95025 MFSD8-245ENST00000641743 948 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms