Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MT-TL1-201ENST00000386347 75 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4BO75351 AL022722.2-201ENST00000402519 180 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 SNORA11.1-201ENST00000408133 129 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 RNU2-62P-201ENST00000410868 191 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 HMGN1P24-201ENST00000412282 298 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS4BO75351 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS4BO75351 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4BO75351 ZNF90P2-204ENST00000419323 1075 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 RPL23AP38-201ENST00000423801 469 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4BO75351 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS4BO75351 RPS6P12-201ENST00000432491 726 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4BO75351 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4BO75351 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4BO75351 RPS15AP9-201ENST00000439856 381 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 CALM1P1-201ENST00000442082 433 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 AC079781.2-201ENST00000446424 169 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS4BO75351 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4BO75351 MTND5P20-201ENST00000448677 143 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4BO75351 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS4BO75351 RN7SL132P-201ENST00000478131 296 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4BO75351 SCARNA24.1-201ENST00000516465 137 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 RNU6-835P-201ENST00000516974 104 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4BO75351 AC006064.5-201ENST00000541782 248 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AC025884.1-201ENST00000556034 378 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 MIR4458-201ENST00000578872 75 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS4BO75351 AC012417.1-201ENST00000582307 1039 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AL162413.1-201ENST00000603198 110 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AL139395.1-201ENST00000603662 160 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AC007038.2-201ENST00000608095 740 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AC004908.2-201ENST00000609090 574 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 AL021997.2-201ENST00000615674 271 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VPS4BO75351 MIR4727-201ENST00000622232 55 ntBASIC4.18□□□□□ -1.74
VPS4BO75351 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
VPS4BO75351 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4BO75351 AL356489.2-201ENST00000566968 3528 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
VPS4BO75351 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS4BO75351 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VPS4BO75351 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
VPS4BO75351 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS4BO75351 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4BO75351 SPRR2C-201ENST00000290702 219 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 RNA5SP175-201ENST00000364275 119 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 MIR153-1-201ENST00000384914 90 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 SNORA11F-201ENST00000408237 128 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 RNU2-47P-201ENST00000410649 186 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4BO75351 OR1AA1P-201ENST00000419597 916 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 BTF3P10-201ENST00000433415 495 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 RPL7P54-201ENST00000438336 674 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 RPL23AP89-201ENST00000439324 255 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS4BO75351 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4BO75351 AL121877.1-201ENST00000453704 622 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4BO75351 AC022364.2-201ENST00000457963 554 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS4BO75351 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4BO75351 RNU7-59P-201ENST00000459101 61 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS4BO75351 S100A11P1-201ENST00000477525 312 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 AC104164.2-201ENST00000496953 495 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4BO75351 SNORA67.7-201ENST00000516664 135 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS4BO75351 AP000857.1-201ENST00000532151 543 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4BO75351 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4BO75351 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS4BO75351 AL133153.1-201ENST00000557756 303 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 AC006130.2-201ENST00000586202 326 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 AP001429.1-201ENST00000602568 530 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 LARP7P1-201ENST00000605576 316 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4BO75351 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
VPS4BO75351 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS4BO75351 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
VPS4BO75351 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS4BO75351 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS4BO75351 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VPS4BO75351 NMD3P1-201ENST00000439704 1488 ntBASIC4.17□□□□□ -1.74
VPS4BO75351 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms