Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RPS15AP7-201ENST00000439294 405 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.18□□□□□ -2.06
UBFD1O14562 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.18□□□□□ -2.06
UBFD1O14562 AC234775.1-201ENST00000454247 670 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.18□□□□□ -2.06
UBFD1O14562 AC011352.3-201ENST00000505162 593 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 MTND3P24-201ENST00000506306 329 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.18□□□□□ -2.06
UBFD1O14562 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.18□□□□□ -2.06
UBFD1O14562 RNU6-237P-201ENST00000515985 71 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.18□□□□□ -2.06
UBFD1O14562 EEF1A1P37-201ENST00000522748 715 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 AC087373.1-201ENST00000524920 491 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 OSBPL9P3-201ENST00000534523 595 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 AL512310.1-201ENST00000548639 172 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 NBEAP1-201ENST00000554452 979 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.18□□□□□ -2.06
UBFD1O14562 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.18□□□□□ -2.06
UBFD1O14562 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.18□□□□□ -2.06
UBFD1O14562 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.18□□□□□ -2.06
UBFD1O14562 AC013562.2-201ENST00000611632 603 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 RMST_10.1-201ENST00000616309 154 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
UBFD1O14562 AC018755.4-201ENST00000619715 454 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.18□□□□□ -2.06
UBFD1O14562 AC103798.2-201ENST00000624292 632 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.18□□□□□ -2.06
UBFD1O14562 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.18□□□□□ -2.06
UBFD1O14562 MTND2P41-201ENST00000637599 773 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 Z99496.1-201ENST00000469424 1477 ntBASIC2.18□□□□□ -2.06
UBFD1O14562 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UBFD1O14562 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
UBFD1O14562 MFSD8-213ENST00000641134 1327 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 PABPC1P9-201ENST00000426076 1612 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
UBFD1O14562 OR56A5-201ENST00000340110 738 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.17□□□□□ -2.06
UBFD1O14562 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.17□□□□□ -2.06
UBFD1O14562 RNU6-730P-201ENST00000383954 104 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
UBFD1O14562 RNU6-77P-201ENST00000410554 91 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AL135786.1-201ENST00000415892 214 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.17□□□□□ -2.06
UBFD1O14562 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.17□□□□□ -2.06
UBFD1O14562 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.17□□□□□ -2.06
UBFD1O14562 AL009174.1-201ENST00000426577 416 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.17□□□□□ -2.06
UBFD1O14562 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.17□□□□□ -2.06
UBFD1O14562 RNFT1P2-201ENST00000443064 757 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AL929288.2-201ENST00000446368 407 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.17□□□□□ -2.06
UBFD1O14562 AC004263.1-201ENST00000479327 332 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AC096751.1-202ENST00000502691 1067 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AC008549.1-201ENST00000512900 643 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 RNU1-104P-201ENST00000517280 175 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 IGJP1-201ENST00000522682 475 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
UBFD1O14562 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UBFD1O14562 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.17□□□□□ -2.06
UBFD1O14562 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UBFD1O14562 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.17□□□□□ -2.06
UBFD1O14562 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.17□□□□□ -2.06
UBFD1O14562 AC022069.1-201ENST00000582910 658 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 VN1R78P-201ENST00000597393 564 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AC012669.1-201ENST00000603209 283 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AL133507.1-201ENST00000605269 557 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AC128687.1-201ENST00000605304 619 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 BNIP3P10-201ENST00000605360 577 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.17□□□□□ -2.06
UBFD1O14562 VIS1.1-201ENST00000610517 203 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AC095031.1-201ENST00000623685 672 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
UBFD1O14562 BX649567.1-201ENST00000642071 1134 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 AC091564.4-201ENST00000533934 2194 ntBASIC2.17□□□□□ -2.06
UBFD1O14562 ZNF658B-202ENST00000615961 3375 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC111188.2-201ENST00000529697 1387 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UBFD1O14562 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UBFD1O14562 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
UBFD1O14562 MIRLET7G-201ENST00000362280 84 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 MIR649-201ENST00000384843 97 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UBFD1O14562 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AC096632.1-201ENST00000427395 310 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 WARS2P1-201ENST00000429678 537 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AL645638.1-201ENST00000440519 361 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AL591719.1-201ENST00000444669 744 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.16□□□□□ -2.06
UBFD1O14562 WASF1P1-201ENST00000447560 1131 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AL353705.4-201ENST00000449661 238 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
UBFD1O14562 GTF2IP9-201ENST00000502460 301 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
UBFD1O14562 MTCYBP20-201ENST00000524239 1129 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AP000790.1-201ENST00000528891 737 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AP000873.5-201ENST00000533906 236 ntBASIC2.16□□□□□ -2.06
UBFD1O14562 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.16□□□□□ -2.06
UBFD1O14562 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.16□□□□□ -2.06
UBFD1O14562 AC103810.1-201ENST00000579873 453 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms