Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXN3O00409 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN3O00409 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN3O00409 AC108059.3-201ENST00000456388 214 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN3O00409 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN3O00409 snoU13.24-201ENST00000458998 104 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 RPS3AP17-201ENST00000472594 777 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AC078785.3-201ENST00000476607 425 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AC069499.1-201ENST00000489433 509 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AL132838.2-201ENST00000492041 314 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AC021146.1-201ENST00000511202 716 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.22□□□□□ -1.73
FOXN3O00409 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN3O00409 RN7SKP122-201ENST00000515923 296 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXN3O00409 AL133153.1-201ENST00000557756 303 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AC234778.2-201ENST00000566241 354 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.22□□□□□ -1.73
FOXN3O00409 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXN3O00409 KC877982.1-201ENST00000602313 470 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AL161729.4-201ENST00000604650 476 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AL591034.3-201ENST00000605511 685 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 MIR98-201ENST00000606724 119 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AP002360.4-201ENST00000606980 481 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AC126118.1-201ENST00000607744 628 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AC245517.5-201ENST00000611529 162 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
FOXN3O00409 U6atac.1-201ENST00000616025 117 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AC073534.2-201ENST00000620377 381 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AL161637.1-201ENST00000622380 412 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 AC112200.1-201ENST00000625015 234 ntBASIC4.22□□□□□ -1.73
FOXN3O00409 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.22□□□□□ -1.73
FOXN3O00409 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXN3O00409 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
FOXN3O00409 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
FOXN3O00409 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.21□□□□□ -1.73
FOXN3O00409 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
FOXN3O00409 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
FOXN3O00409 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXN3O00409 AC015813.6-201ENST00000624409 5808 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXN3O00409 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXN3O00409 Y_RNA.6-201ENST00000362350 114 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 RNU6-173P-201ENST00000364215 104 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXN3O00409 AL022722.2-201ENST00000402519 180 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 RNU4-65P-201ENST00000410473 140 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 MTND1P21-201ENST00000412991 285 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN3O00409 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXN3O00409 ELOCP4-201ENST00000420090 333 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXN3O00409 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXN3O00409 AC009961.2-201ENST00000435771 251 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 Z74696.2-201ENST00000436514 498 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 RPL35AP22-201ENST00000436855 335 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXN3O00409 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXN3O00409 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.21□□□□□ -1.74
FOXN3O00409 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN3O00409 RNU7-59P-201ENST00000459101 61 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 RPS23P7-201ENST00000466210 444 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 NIPA2P2-201ENST00000496376 1083 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
FOXN3O00409 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.21□□□□□ -1.74
FOXN3O00409 HMGB1P22-201ENST00000505315 124 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.21□□□□□ -1.74
FOXN3O00409 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXN3O00409 AC087369.1-201ENST00000520775 996 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN3O00409 DEFB108A-201ENST00000530110 222 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 SNRPGP16-201ENST00000533275 226 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN3O00409 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN3O00409 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.21□□□□□ -1.74
FOXN3O00409 AP000860.1-201ENST00000605250 559 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 RNU4-89P-201ENST00000607443 133 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 AC004067.1-201ENST00000608733 700 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXN3O00409 AL590282.1-201ENST00000610379 1136 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.21□□□□□ -1.74
FOXN3O00409 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXN3O00409 AC112484.5-201ENST00000624189 228 ntBASIC4.21□□□□□ -1.74
FOXN3O00409 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.21□□□□□ -1.74
FOXN3O00409 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
FOXN3O00409 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXN3O00409 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
FOXN3O00409 AP001148.1-201ENST00000624124 2359 ntBASIC4.2□□□□□ -1.74
FOXN3O00409 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.2□□□□□ -1.74
FOXN3O00409 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
FOXN3O00409 RNU5E-8P-201ENST00000363502 116 ntBASIC4.2□□□□□ -1.74
FOXN3O00409 SNORA7.2-201ENST00000364446 145 ntBASIC4.2□□□□□ -1.74
FOXN3O00409 AC068538.1-201ENST00000376856 336 ntBASIC4.2□□□□□ -1.74
FOXN3O00409 RNU6-259P-201ENST00000383999 107 ntBASIC4.2□□□□□ -1.74
FOXN3O00409 MIR607-201ENST00000385241 96 ntBASIC4.2□□□□□ -1.74
FOXN3O00409 RNU6-328P-201ENST00000390887 106 ntBASIC4.2□□□□□ -1.74
FOXN3O00409 RPL23AP32-201ENST00000395315 459 ntBASIC4.2□□□□□ -1.74
FOXN3O00409 MIR548F1-201ENST00000408667 84 ntBASIC4.2□□□□□ -1.74
FOXN3O00409 RNA5SP317-201ENST00000410176 116 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms