Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 RPS27P29-201ENST00000463110 252 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 RPL31P13-201ENST00000484151 370 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC068724.1-201ENST00000487100 792 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC096576.1-201ENST00000489014 359 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC021146.5-201ENST00000503544 545 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 COX7A2P2-201ENST00000505291 250 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC118282.1-201ENST00000506408 765 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC093281.2-201ENST00000510153 597 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 RPL12P22-201ENST00000519073 490 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AP004371.1-201ENST00000525240 214 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AP003461.1-201ENST00000528866 78 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AP000889.1-201ENST00000530968 660 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC024224.1-201ENST00000538284 609 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 OR4T1P-201ENST00000554933 911 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 VN1R90P-201ENST00000595717 726 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC128687.1-201ENST00000605304 619 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AL357080.1-201ENST00000617394 239 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AC104454.1-201ENST00000421341 1401 ntBASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.16□□□□□ -1.9
NEDD8-MDP1E9PL57 AF117829.1-206ENST00000621883 3802 ntBASIC3.15□□□□□ -1.9
NEDD8-MDP1E9PL57 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.15□□□□□ -1.9
NEDD8-MDP1E9PL57 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-1200P-201ENST00000384162 107 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC110754.1-201ENST00000399740 601 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 RPL7P25-201ENST00000404151 721 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 MTATP6P27-201ENST00000416987 621 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC019178.2-201ENST00000423595 505 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC092447.3-201ENST00000426027 686 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 MTND4LP10-201ENST00000435146 291 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 MTCYBP3-201ENST00000445588 1137 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 RPS24P6-201ENST00000452670 400 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 BX322784.1-201ENST00000455793 1077 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 SNORA59A-201ENST00000459326 152 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC004263.1-201ENST00000479327 332 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 OR2A20P-203ENST00000498397 1268 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC006390.1-201ENST00000508068 283 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC119751.5-201ENST00000514077 770 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC093677.1-201ENST00000514414 678 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 COX6CP8-201ENST00000522620 226 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 SETP7-201ENST00000552169 453 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 TRAV37-201ENST00000553906 342 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 OR4H12P-201ENST00000556269 907 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC004987.4-201ENST00000603383 338 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC010738.1-201ENST00000604970 987 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC055876.5-201ENST00000605667 259 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC024560.3-201ENST00000608482 349 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AL596245.1-201ENST00000618994 362 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC079228.1-201ENST00000624774 1049 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AL356473.1-201ENST00000406203 1408 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AC000403.1-201ENST00000613696 3585 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 SGO1P2-201ENST00000429458 1589 ntBASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.15□□□□□ -1.91
NEDD8-MDP1E9PL57 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 RNA5SP295-201ENST00000362655 121 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 SNORA7.2-201ENST00000364446 145 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-7-201ENST00000364784 107 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 RNU6-8-201ENST00000365467 107 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 TAS2R15P-201ENST00000390674 928 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 CYCSP45-201ENST00000402289 315 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 RAP1BP1-201ENST00000412709 553 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 RAD23BP2-201ENST00000416003 1207 ntBASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.14□□□□□ -1.91
NEDD8-MDP1E9PL57 TRIAP1P1-201ENST00000427062 225 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms