Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.37□□□□□ -2.19
COL6A5A8TX70 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.37□□□□□ -2.19
COL6A5A8TX70 U73479.1-201ENST00000618062 168 ntBASIC1.37□□□□□ -2.19
COL6A5A8TX70 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
COL6A5A8TX70 DYNLT3P1-201ENST00000378574 347 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 SETP8-201ENST00000435341 628 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 RPS27P5-201ENST00000444247 244 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 ATG10-AS1-201ENST00000504846 648 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 SNX5P1-201ENST00000505757 1041 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 SETP7-201ENST00000552169 453 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 TPMTP1-201ENST00000592307 737 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC073348.1-201ENST00000623002 331 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL6A5A8TX70 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 AP001148.1-201ENST00000624124 2359 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC110491.1-201ENST00000562191 2010 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL6A5A8TX70 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL6A5A8TX70 AL359273.1-201ENST00000510918 627 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 RNU6-84P-201ENST00000607737 102 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 VN1R7P-201ENST00000619242 903 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC009452.1-201ENST00000640823 606 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 ZNF355P-201ENST00000427301 3216 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 ZNF876P-202ENST00000398732 1485 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC234781.2-201ENST00000426370 994 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 RNA5SP309-201ENST00000516670 106 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC019176.1-201ENST00000518519 225 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A5A8TX70 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL6A5A8TX70 AC104581.2-201ENST00000572227 430 ntBASIC1.36□□□□□ -2.19
COL6A5A8TX70 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.35□□□□□ -2.19
COL6A5A8TX70 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL6A5A8TX70 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL6A5A8TX70 AC009487.4-201ENST00000624969 3585 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 AL121972.1-201ENST00000402023 252 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 RNU6-174P-201ENST00000410406 106 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 AC009965.2-201ENST00000425328 970 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 RPS3AP44-201ENST00000425466 790 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 AL138787.1-202ENST00000437804 898 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.35□□□□□ -2.19
COL6A5A8TX70 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.35□□□□□ -2.19
COL6A5A8TX70 MAGOH2P-202ENST00000584384 429 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 MIR5002-201ENST00000584713 97 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 BNIP3P7-201ENST00000605641 516 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 VN1R74P-201ENST00000613259 503 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.35□□□□□ -2.19
COL6A5A8TX70 SNORD88.1-201ENST00000408684 91 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
COL6A5A8TX70 GSTA11P-201ENST00000452866 669 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.35□□□□□ -2.19
COL6A5A8TX70 AC034222.1-201ENST00000494052 532 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 AC006390.1-201ENST00000508068 283 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 COX6CP5-201ENST00000527162 228 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.35□□□□□ -2.19
COL6A5A8TX70 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.35□□□□□ -2.19
COL6A5A8TX70 AC069234.5-201ENST00000611056 416 ntBASIC1.35□□□□□ -2.19
COL6A5A8TX70 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
COL6A5A8TX70 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
COL6A5A8TX70 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL6A5A8TX70 ICE2P2-201ENST00000483823 2787 ntBASIC1.34□□□□□ -2.19
COL6A5A8TX70 MTND5P7-201ENST00000413558 1798 ntBASIC1.34□□□□□ -2.19
COL6A5A8TX70 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL6A5A8TX70 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.34□□□□□ -2.19
COL6A5A8TX70 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL6A5A8TX70 Z99497.1-201ENST00000421282 135 ntBASIC1.34□□□□□ -2.19
COL6A5A8TX70 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.34□□□□□ -2.19
COL6A5A8TX70 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.34□□□□□ -2.19
COL6A5A8TX70 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.34□□□□□ -2.19
COL6A5A8TX70 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.34□□□□□ -2.19
COL6A5A8TX70 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.34□□□□□ -2.19
COL6A5A8TX70 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.34□□□□□ -2.19
COL6A5A8TX70 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.34□□□□□ -2.19
COL6A5A8TX70 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL6A5A8TX70 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL6A5A8TX70 DDX43P2-201ENST00000604753 1354 ntBASIC1.34□□□□□ -2.2
COL6A5A8TX70 Y_RNA.549-201ENST00000384657 102 ntBASIC1.34□□□□□ -2.2
COL6A5A8TX70 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.34□□□□□ -2.2
COL6A5A8TX70 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL6A5A8TX70 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.34□□□□□ -2.2
COL6A5A8TX70 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.34□□□□□ -2.2
COL6A5A8TX70 EEF1B2P4-201ENST00000551398 348 ntBASIC1.34□□□□□ -2.2
COL6A5A8TX70 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL6A5A8TX70 CYP3A137P-201ENST00000562436 69 ntBASIC1.34□□□□□ -2.2
COL6A5A8TX70 AC109446.2-201ENST00000567872 497 ntBASIC1.34□□□□□ -2.2
COL6A5A8TX70 AC245036.5-201ENST00000596330 847 ntBASIC1.34□□□□□ -2.2
COL6A5A8TX70 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms