Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 ELOCP10-201ENST00000440624 327 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 MTND5P8-201ENST00000449817 1083 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 MTND2P8-201ENST00000450555 1025 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 TPRKBP1-201ENST00000456243 481 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AC009268.1-201ENST00000561352 1203 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AC083899.3-201ENST00000603413 594 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 ELOCP34-201ENST00000604436 327 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 MTND4P21-201ENST00000453886 1357 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 SNORA31-201ENST00000362607 130 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 MIR1294-201ENST00000408503 142 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 RPL7P46-201ENST00000425129 740 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 MORF4L1P7-201ENST00000426038 703 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 MTND3P4-201ENST00000453537 303 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AC107398.1-201ENST00000486904 505 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 MTATP6P22-201ENST00000507369 598 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AC021146.7-201ENST00000509604 775 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AL161713.1-201ENST00000555538 145 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AC060766.3-201ENST00000591442 263 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AL512598.1-201ENST00000610158 273 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AC009318.3-201ENST00000616916 503 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 MIR421-201ENST00000365696 85 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 Z98749.2-208ENST00000381646 500 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 RNU6-98P-201ENST00000384173 107 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 AC013404.1-201ENST00000413068 249 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 AC009965.2-201ENST00000425328 970 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 RSL24D1P8-201ENST00000434442 492 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 MTND2P21-201ENST00000436242 1042 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 ARL5AP3-201ENST00000439327 386 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 RPS27P5-201ENST00000444247 244 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 RPL23AP20-201ENST00000447965 421 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 HSPE1P22-201ENST00000456856 327 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 AC013444.2-201ENST00000603317 787 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 AL627309.6-201ENST00000606857 840 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 AC116563.2-201ENST00000624751 535 ntBASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
COL6A6A6NMZ7 AC000367.1-201ENST00000452711 1766 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 MIR92A2-201ENST00000385299 75 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 AP000873.1-201ENST00000463987 400 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 SNRPGP3-201ENST00000469405 227 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 AC006483.1-201ENST00000487308 313 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 AC008526.1-201ENST00000509149 338 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 FAM92A1P1-201ENST00000528023 890 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 AC023158.1-201ENST00000561632 1025 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 AC027104.1-201ENST00000563702 681 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 AC011374.2-201ENST00000607135 526 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 AC135803.1-201ENST00000608748 565 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 AC015726.3-201ENST00000624501 418 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL6A6A6NMZ7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AC103988.1-201ENST00000566382 2177 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 Y_RNA.205-201ENST00000364128 113 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 MIR124-3-201ENST00000384866 87 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 HMGB1P13-201ENST00000406019 642 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 MTCO3P30-201ENST00000426425 670 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 SSXP1-201ENST00000453640 473 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 SNORD108-201ENST00000459332 71 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AC012181.1-201ENST00000479895 423 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 MTND4LP22-201ENST00000508209 276 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 CBX3P4-201ENST00000538909 354 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AC009032.1-201ENST00000617574 431 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms