Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC129850.1-201ENST00000436203 508 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 COX6CP5-201ENST00000527162 228 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 RPS3AP23-202ENST00000574601 686 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 MAGOH2P-202ENST00000584384 429 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 VN1R74P-201ENST00000613259 503 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 UBE2V2P1-201ENST00000434717 398 ntBASIC1.65□□□□□ -2.14
CNOT1A5YKK6 ARPC3P1-201ENST00000437218 533 ntBASIC1.65□□□□□ -2.14
CNOT1A5YKK6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.65□□□□□ -2.14
CNOT1A5YKK6 XKRY2-201ENST00000442362 1093 ntBASIC1.65□□□□□ -2.14
CNOT1A5YKK6 CASP3P1-201ENST00000446037 609 ntBASIC1.65□□□□□ -2.14
CNOT1A5YKK6 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.65□□□□□ -2.14
CNOT1A5YKK6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.65□□□□□ -2.14
CNOT1A5YKK6 AC034244.1-201ENST00000507687 207 ntBASIC1.65□□□□□ -2.14
CNOT1A5YKK6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.65□□□□□ -2.14
CNOT1A5YKK6 AC087241.2-201ENST00000535801 324 ntBASIC1.65□□□□□ -2.14
CNOT1A5YKK6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC1.65□□□□□ -2.14
CNOT1A5YKK6 AC060766.3-201ENST00000591442 263 ntBASIC1.65□□□□□ -2.14
CNOT1A5YKK6 AC244517.1-201ENST00000606030 2086 ntBASIC1.65□□□□□ -2.14
CNOT1A5YKK6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.14
CNOT1A5YKK6 TEX21P-201ENST00000447107 1476 ntBASIC1.65□□□□□ -2.14
CNOT1A5YKK6 RNU6-174P-201ENST00000410406 106 ntBASIC1.65□□□□□ -2.15
CNOT1A5YKK6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.65□□□□□ -2.15
CNOT1A5YKK6 AC005534.2-201ENST00000431047 433 ntBASIC1.65□□□□□ -2.15
CNOT1A5YKK6 MTCO1P43-201ENST00000431831 488 ntBASIC1.65□□□□□ -2.15
CNOT1A5YKK6 SETP8-201ENST00000435341 628 ntBASIC1.65□□□□□ -2.15
CNOT1A5YKK6 BNIP3P2-201ENST00000441221 577 ntBASIC1.65□□□□□ -2.15
CNOT1A5YKK6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.65□□□□□ -2.15
CNOT1A5YKK6 RPS29P1-201ENST00000465274 159 ntBASIC1.65□□□□□ -2.15
CNOT1A5YKK6 AP000852.1-201ENST00000472460 573 ntBASIC1.65□□□□□ -2.15
CNOT1A5YKK6 RNU6-1223P-201ENST00000517124 104 ntBASIC1.65□□□□□ -2.15
CNOT1A5YKK6 AC004486.1-201ENST00000546846 233 ntBASIC1.65□□□□□ -2.15
CNOT1A5YKK6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CNOT1A5YKK6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.65□□□□□ -2.15
CNOT1A5YKK6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
CNOT1A5YKK6 MIR591-201ENST00000385290 95 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 RNU1-101P-201ENST00000391171 127 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 AC021382.1-201ENST00000483523 359 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 AC008015.1-201ENST00000555505 465 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 AL121821.2-201ENST00000556081 394 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 ZNF720P1-201ENST00000562403 1939 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 AL645939.4-201ENST00000604495 135 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 CR382285.2-201ENST00000624662 1495 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CNOT1A5YKK6 OR4G11P-202ENST00000642116 1414 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 RNU1-42P-201ENST00000364033 160 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CNOT1A5YKK6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 RNU6-603P-201ENST00000411403 107 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.64□□□□□ -2.15
CNOT1A5YKK6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.64□□□□□ -2.15
CNOT1A5YKK6 FABP5P5-201ENST00000515537 406 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CNOT1A5YKK6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.64□□□□□ -2.15
CNOT1A5YKK6 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.64□□□□□ -2.15
CNOT1A5YKK6 AL135786.2-201ENST00000608422 615 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 AL137847.3-201ENST00000611521 109 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 AC116447.1-201ENST00000613153 453 ntBASIC1.64□□□□□ -2.15
CNOT1A5YKK6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CNOT1A5YKK6 RNY1P4-201ENST00000384595 115 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 RNU6-882P-201ENST00000391025 103 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AC034222.1-201ENST00000494052 532 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AC103987.3-201ENST00000582071 292 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AL160237.3-201ENST00000604114 1013 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AP000787.2-201ENST00000604432 568 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AC012150.2-201ENST00000621300 544 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AL133216.2-202ENST00000634512 349 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AL118496.1-201ENST00000440201 1812 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 MTND5P7-201ENST00000413558 1798 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
CNOT1A5YKK6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
CNOT1A5YKK6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
CNOT1A5YKK6 RNA5SP160-201ENST00000364866 120 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 Y_RNA.303-201ENST00000364998 94 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 XKRYP4-201ENST00000414395 483 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AL645568.3-201ENST00000433683 316 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 USP9YP15-201ENST00000442391 422 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 XKRYP5-201ENST00000449659 483 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AC104472.2-201ENST00000469035 601 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AC090751.1-201ENST00000566966 267 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AC013562.2-201ENST00000611632 603 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CNOT1A5YKK6 AL353770.2-201ENST00000620024 78 ntBASIC1.63□□□□□ -2.15
CNOT1A5YKK6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.62□□□□□ -2.15
CNOT1A5YKK6 FNDC3CP-201ENST00000420795 1155 ntBASIC1.62□□□□□ -2.15
CNOT1A5YKK6 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.62□□□□□ -2.15
CNOT1A5YKK6 AC098934.3-201ENST00000430450 190 ntBASIC1.62□□□□□ -2.15
CNOT1A5YKK6 CALM1P2-201ENST00000452941 448 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms