Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 MIR208A-201ENST00000362287 71 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 SNORA5B-201ENST00000363786 132 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 SNORA3A-201ENST00000364113 130 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 CYCSP45-201ENST00000402289 315 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 SNORD23.1-201ENST00000408212 104 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 RNU6-193P-201ENST00000410977 107 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 ZNF90P2-204ENST00000419323 1075 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 COX6CP12-201ENST00000446748 202 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 AC106872.3-201ENST00000495104 446 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 EIF4EP3-201ENST00000498782 656 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 AC133963.2-201ENST00000513686 578 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 AC114781.4-201ENST00000513707 639 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 AC067904.2-201ENST00000517322 1283 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 IGKV2D-36-201ENST00000518643 226 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 HSPE1P3-201ENST00000559254 309 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 AC104581.2-201ENST00000572227 430 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 OR4G1P-201ENST00000588632 938 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 SNORD14A-201ENST00000606526 91 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 AC005332.10-201ENST00000612725 619 ntBASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TCRBV3S1A0A5B6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 SNORA38-201ENST00000363946 132 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 SFR1P1-201ENST00000403720 688 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 AC105402.1-201ENST00000413336 545 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 ARL2BPP3-201ENST00000421226 480 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 RNF2P1-201ENST00000442955 1010 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 RPS29P11-201ENST00000496507 171 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 AC008494.2-201ENST00000514544 370 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 AC083923.1-201ENST00000523708 376 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 MIR3162-201ENST00000581818 82 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 HSPE1P7-201ENST00000604681 321 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 AL355810.1-201ENST00000614629 552 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 U6.48-201ENST00000618523 106 ntBASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TCRBV3S1A0A5B6 SGO1P2-201ENST00000429458 1589 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 FAM133CP-201ENST00000332869 704 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 RNU6-1243P-201ENST00000364028 107 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 SNORA16B-201ENST00000364674 135 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 RNU6-31P-201ENST00000384388 108 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 MIR17-201ENST00000385012 84 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AL513475.1-201ENST00000406602 315 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AC096664.2-201ENST00000411843 406 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 Z98742.2-201ENST00000431564 187 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 UBE2V1P13-201ENST00000436983 439 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 SDCBPP1-201ENST00000440192 890 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 SETP6-201ENST00000479329 568 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 HSPE1P6-201ENST00000479457 291 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AP001804.3-201ENST00000525146 880 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AC068790.3-201ENST00000602988 553 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 XIAPP1-201ENST00000603162 600 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 AP006437.1-201ENST00000641440 3685 ntBASIC1.64□□□□□ -2.15
TCRBV3S1A0A5B6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TCRBV3S1A0A5B6 RNU6-263P-201ENST00000363811 107 ntBASIC1.63□□□□□ -2.15
TCRBV3S1A0A5B6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TCRBV3S1A0A5B6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TCRBV3S1A0A5B6 MIR23B-201ENST00000384832 97 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms