Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 Y_RNA.46-201ENST00000362695 102 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORD115.1-201ENST00000391109 76 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL136372.1-201ENST00000403060 228 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RPL7P25-201ENST00000404151 721 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNA5SP293-201ENST00000410527 113 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC078974.1-201ENST00000411597 223 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC245291.1-201ENST00000419501 328 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RPL7P2-201ENST00000427639 268 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 COX6CP2-201ENST00000444980 225 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RN7SL330P-201ENST00000469709 307 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC080014.1-201ENST00000496877 1201 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 HMGN1P11-201ENST00000508668 303 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC004062.1-201ENST00000509926 645 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 NPM1P41-201ENST00000512920 831 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC117532.1-201ENST00000514638 323 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 FABP5P5-201ENST00000515537 406 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RN7SKP289-201ENST00000517244 295 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 FAM60BP-201ENST00000578364 658 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AP001981.2-201ENST00000603241 418 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC010591.1-201ENST00000603941 649 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC135507.1-201ENST00000607214 561 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL355810.1-201ENST00000614629 552 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL158063.1-201ENST00000615349 536 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC027807.2-201ENST00000616099 408 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC244258.1-201ENST00000637553 1071 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC092125.1-201ENST00000562568 1995 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC138915.3-201ENST00000562908 1389 ntBASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC009812.4-201ENST00000569134 1805 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MTCO1P9-201ENST00000505577 1534 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RPL7P26-201ENST00000333817 754 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 U3.4-201ENST00000363352 213 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORA70.2-201ENST00000364506 135 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU4-91P-201ENST00000364778 135 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORA73.2-201ENST00000364946 201 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU5E-5P-201ENST00000365379 116 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-805P-201ENST00000365643 106 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-809P-201ENST00000384461 107 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RPS20P2-201ENST00000402520 389 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RPS3AP24-201ENST00000407896 734 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SEPT2P1-201ENST00000419651 180 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 OR4K11P-201ENST00000431829 904 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC004866.2-201ENST00000438285 481 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL121871.1-201ENST00000443413 436 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TAF9P1-201ENST00000445421 515 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC125238.1-201ENST00000448842 249 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TPT1P12-201ENST00000448968 492 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TAF9P2-201ENST00000454958 515 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 VN1R17P-201ENST00000472048 1090 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-201P-201ENST00000517100 61 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MTND4LP18-201ENST00000526864 291 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNRPGP16-201ENST00000533275 226 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 U73023.1-201ENST00000603134 700 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC067959.1-201ENST00000604334 379 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL451086.1-201ENST00000605596 223 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC012443.1-201ENST00000605605 231 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC009090.3-201ENST00000616553 565 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC009268.2-201ENST00000621925 457 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC025048.6-202ENST00000627667 438 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AP003399.1-201ENST00000637534 361 ntBASIC3.09□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC091152.2-201ENST00000591628 2569 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms