Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ARF4P4-201ENST00000439608 520 ntBASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 MTND2P20-201ENST00000440805 661 ntBASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 snoU13.22-201ENST00000459428 104 ntBASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 RNU6-840P-201ENST00000517275 65 ntBASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 AC005476.1-201ENST00000554427 397 ntBASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 AL132857.1-201ENST00000555180 708 ntBASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 AC087465.1-201ENST00000560574 245 ntBASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 AC018926.1-201ENST00000616335 435 ntBASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
TRAV25A0A0B4J276 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AL137003.2-201ENST00000606924 2538 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 MIR30E-201ENST00000362104 92 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 RNU6-217P-201ENST00000384164 104 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 MTND4P13-201ENST00000402078 1023 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AL357075.1-201ENST00000404107 726 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AL139421.1-201ENST00000423010 169 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 MTATP6P11-201ENST00000428071 670 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AL390023.1-201ENST00000428836 262 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC244505.4-201ENST00000434905 287 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 Z80107.1-201ENST00000436830 412 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 BNIP3P2-201ENST00000441221 577 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 SSXP5-201ENST00000443473 287 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 DPPA3P1-201ENST00000448050 469 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 NANOGNBP1-201ENST00000448444 480 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC091153.1-201ENST00000466297 402 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 LARP1BP2-201ENST00000486594 519 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC093801.2-201ENST00000503966 1050 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC021678.1-201ENST00000505195 936 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 SUMO2P6-201ENST00000505273 288 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC114786.4-201ENST00000508771 728 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC114797.1-201ENST00000514003 728 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC109329.2-201ENST00000519658 482 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC022634.1-201ENST00000520765 532 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 NDUFB9P3-201ENST00000521269 501 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 SLC2A13P1-201ENST00000531560 322 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 HIGD1AP17-201ENST00000554576 276 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AL136520.1-202ENST00000555494 763 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AL355836.1-201ENST00000555951 870 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC009163.5-201ENST00000575421 637 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AL162713.1-201ENST00000604480 262 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC069545.1-201ENST00000605671 358 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 AC013476.2-201ENST00000614456 459 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 PABPC1P9-201ENST00000426076 1612 ntBASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
TRAV25A0A0B4J276 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 OR1S2-201ENST00000302592 978 ntBASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 RN7SKP226-201ENST00000364912 300 ntBASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 RNVU1-14-201ENST00000384770 164 ntBASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 AL096701.2-201ENST00000416920 238 ntBASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 ZNF863P-201ENST00000426746 417 ntBASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 GTF2IP7-202ENST00000436677 309 ntBASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 PTGES3P1-201ENST00000439531 483 ntBASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 HMGB3P11-201ENST00000440127 604 ntBASIC2.44□□□□□ -2.02
TRAV25A0A0B4J276 OR10R1P-201ENST00000441524 1141 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms