Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 RNU4-20P-201ENST00000365601 151 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 Y_RNA.534-201ENST00000384599 112 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 UBE2V1P2-201ENST00000397758 440 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 AL139397.2-201ENST00000404529 772 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 TMEM167AP1-201ENST00000423409 219 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 RPL35AP12-201ENST00000425362 338 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 HSPD1P21-201ENST00000436541 245 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 AC004801.2-202ENST00000463559 283 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 Y_RNA.654-201ENST00000497848 106 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 SNORA43.3-201ENST00000517240 103 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 PSMA2P1-201ENST00000526365 646 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 AP000648.1-201ENST00000529682 397 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 ZNF192P1-203ENST00000565888 810 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 AC008521.2-201ENST00000591021 259 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 AC104260.1-201ENST00000616660 539 ntBASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
GTF3C3Q9Y5Q9 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC007685.1-201ENST00000329806 452 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 Y_RNA.373-201ENST00000365600 103 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 RNU6-1127P-201ENST00000384580 107 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 RNU6-1009P-201ENST00000390996 107 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 RPL7P12-201ENST00000446719 750 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC108022.1-201ENST00000493466 478 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 MTCO2P30-201ENST00000503662 364 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 HSD3BP3-201ENST00000514706 994 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 RNU6-1282P-201ENST00000516735 96 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 RNU6-709P-201ENST00000517257 104 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC023050.3-201ENST00000541142 333 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC007424.1-203ENST00000554613 687 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 PSMA3P-201ENST00000555485 635 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 HMGN1P26-201ENST00000558737 303 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 U2.17-201ENST00000611454 95 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AL512643.1-201ENST00000635735 524 ntBASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC6.35□□□□□ -1.39
GTF3C3Q9Y5Q9 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 SNORD70.1-201ENST00000391007 85 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 RN7SKP53-201ENST00000411337 315 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 RPL7P10-201ENST00000417407 739 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 PIGFP3-201ENST00000441918 722 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 HMGN2P16-201ENST00000456802 261 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 AC005532.2-201ENST00000467154 373 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 RNA5SP471-201ENST00000516971 106 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 AC022690.1-201ENST00000526681 550 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 AL110115.1-201ENST00000614396 364 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 AC004825.2-201ENST00000616634 455 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 AC135068.12-201ENST00000637370 931 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 MAPK10-320ENST00000641462 6696 ntBASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GTF3C3Q9Y5Q9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
GTF3C3Q9Y5Q9 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
GTF3C3Q9Y5Q9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.34□□□□□ -1.4
GTF3C3Q9Y5Q9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC6.33□□□□□ -1.4
GTF3C3Q9Y5Q9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GTF3C3Q9Y5Q9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
GTF3C3Q9Y5Q9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
GTF3C3Q9Y5Q9 AL139039.1-201ENST00000401900 692 ntBASIC6.33□□□□□ -1.4
GTF3C3Q9Y5Q9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.33□□□□□ -1.4
GTF3C3Q9Y5Q9 AL592045.1-201ENST00000429867 352 ntBASIC6.33□□□□□ -1.4
GTF3C3Q9Y5Q9 NDUFB4P6-201ENST00000436819 366 ntBASIC6.33□□□□□ -1.4
GTF3C3Q9Y5Q9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms