Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC012417.1-201ENST00000582307 1039 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 SNORD84-203ENST00000584275 78 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC008752.3-201ENST00000588113 712 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 GLUD1P4-201ENST00000590914 418 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AL356055.1-201ENST00000602528 446 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 NRBF2P5-201ENST00000603087 788 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC025449.1-201ENST00000603896 529 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC007621.1-201ENST00000604544 437 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC008536.2-201ENST00000607284 349 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AL021997.2-201ENST00000615674 271 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 uc_338.13-201ENST00000618243 179 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC104985.2-201ENST00000620598 500 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AL136964.1-201ENST00000622038 2990 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC019278.1-201ENST00000623516 479 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC116667.1-201ENST00000604855 2072 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 MIR372-201ENST00000362225 67 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 RNU5E-8P-201ENST00000363502 116 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 RNA5SP175-201ENST00000364275 119 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-628P-201ENST00000410675 107 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 ZNF90P2-204ENST00000419323 1075 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 HSFY6P-201ENST00000445573 403 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC073587.1-201ENST00000447093 876 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 RAD23BP3-201ENST00000454157 1152 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC007967.1-201ENST00000455422 1159 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 SNORD108-201ENST00000459332 71 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC083798.1-201ENST00000472671 131 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC114781.4-201ENST00000513707 639 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-1220P-201ENST00000517126 108 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC023632.4-201ENST00000517783 191 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC126177.3-201ENST00000551839 688 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AL121603.1-201ENST00000553815 142 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC093788.1-201ENST00000609356 927 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 MIR7154-201ENST00000620673 73 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 MIR4275-201ENST00000636486 87 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 MIR492-201ENST00000638676 116 ntBASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHB1Q9Y5F3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 NOL8P1-201ENST00000508336 3529 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AL365440.1-201ENST00000436135 2167 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 RNU1-108P-201ENST00000362556 161 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-797P-201ENST00000363101 109 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-534P-201ENST00000364877 106 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 MIR135A2-201ENST00000384854 100 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 MIR558-201ENST00000384920 94 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 RNA5SP171-201ENST00000391071 115 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 RNA5SP107-201ENST00000411358 122 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AMD1P2-201ENST00000412936 992 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 RPS23P10-201ENST00000416185 486 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AL451062.2-201ENST00000427515 271 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 RPS20P5-201ENST00000434808 360 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 CALM1P1-201ENST00000442082 433 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 DDX3P2-201ENST00000446138 111 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 DPPA3P1-201ENST00000448050 469 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 RPL35AP15-201ENST00000468042 339 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 RPS15AP36-201ENST00000492022 382 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AC026801.2-201ENST00000515352 425 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 RNU7-51P-201ENST00000516560 62 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms