Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SNORA60-201ENST00000362396 134 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 RNU6-1068P-201ENST00000410958 103 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 BEND7P1-201ENST00000422058 457 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 NANOGP6-201ENST00000429190 847 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AL358934.1-201ENST00000432346 324 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 HSPE1P28-201ENST00000443139 211 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 CECR9-201ENST00000453421 199 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AL162395.1-201ENST00000457882 422 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 SNORD19B-201ENST00000459623 84 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC025554.1-201ENST00000505641 188 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC021146.3-201ENST00000511911 260 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 RNA5SP497-201ENST00000516081 97 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC008694.2-201ENST00000517591 306 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 HMGB1P41-201ENST00000520234 440 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC068587.4-201ENST00000533893 186 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC005357.1-201ENST00000588399 301 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 BMS1P7-201ENST00000602440 1052 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC009268.2-201ENST00000621925 457 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AL732618.1-201ENST00000623251 301 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 PISRT1-201ENST00000626175 531 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 MIR1302-1-201ENST00000637932 143 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 DHX9P1-201ENST00000436565 3076 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC067945.1-201ENST00000342609 618 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 Y_RNA.31-201ENST00000362574 102 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 RNU6-451P-201ENST00000362921 107 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 Y_RNA.202-201ENST00000364083 110 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 RN7SKP186-201ENST00000365371 303 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 RNU6-1106P-201ENST00000390845 107 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC245054.2-201ENST00000415639 319 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 SDCBPP2-201ENST00000424643 885 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 MTND6P18-201ENST00000439477 513 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AL353898.1-201ENST00000444055 238 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC012170.1-201ENST00000495139 359 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 Y_RNA.682-201ENST00000516457 100 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 HIF1AP1-201ENST00000553642 175 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 HSPE1P5-201ENST00000561489 272 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 HMGN1P30-201ENST00000589286 268 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 CKS1BP3-201ENST00000600888 237 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AL391646.1-201ENST00000603860 190 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 PRELID3BP8-201ENST00000604148 295 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC068722.2-201ENST00000618734 544 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 AC139792.3-201ENST00000623525 224 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 MTND4P35-201ENST00000604257 1375 ntBASIC3.02□□□□□ -1.93
NOTCH3Q9UM47 OR51H2P-202ENST00000641424 3046 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AL031985.3-201ENST00000565390 2449 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 Y_RNA.112-201ENST00000363250 102 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 RNU6-209P-201ENST00000384118 107 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 SNORA51.12-201ENST00000384448 134 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 RNU6-308P-201ENST00000390957 107 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AL139095.1-201ENST00000404326 391 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 RNU4-61P-201ENST00000411243 107 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AC097499.1-201ENST00000444277 208 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AL590365.1-201ENST00000450788 243 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 POU5F1P7-201ENST00000508759 541 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 Y_RNA.718-201ENST00000517110 102 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 SNRPGP18-201ENST00000553000 214 ntBASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.01□□□□□ -1.93
NOTCH3Q9UM47 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms