Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC107982.1-201ENST00000507171 1300 ntBASIC2.96□□□□□ -1.93
CDH9Q9ULB4 AC011460.1-201ENST00000636268 1834 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AP003122.5-201ENST00000527668 3766 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 U8.9-201ENST00000365667 134 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 SNORA26.7-201ENST00000391288 122 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AL450338.1-201ENST00000407987 512 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 GTF2IP7-202ENST00000436677 309 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC004924.1-201ENST00000480160 781 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AP004217.1-201ENST00000480579 346 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 RNA5SP356-201ENST00000515972 94 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 RNU6-56P-201ENST00000516986 93 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC079600.2-201ENST00000550076 130 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC006116.7-201ENST00000590141 756 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AL390838.2-201ENST00000602394 274 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 ATP1B3P1-201ENST00000605365 821 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC097504.2-201ENST00000608088 454 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AP002826.1-201ENST00000608835 315 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AL020991.1-201ENST00000612314 373 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AL355493.4-201ENST00000618530 292 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AC253576.2-201ENST00000618815 580 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 AP003476.1-201ENST00000623984 516 ntBASIC2.96□□□□□ -1.94
CDH9Q9ULB4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.96□□□□□ -1.94
CDH9Q9ULB4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AP005901.5-201ENST00000545779 1796 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 MIR26A1-201ENST00000362205 77 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 CD24P4-201ENST00000382840 243 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 Y_RNA.578-201ENST00000390903 88 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AL138827.1-201ENST00000402666 306 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC096533.1-201ENST00000411645 353 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AL451074.5-201ENST00000415894 435 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 BEND7P1-201ENST00000422058 457 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 TMEM167AP1-201ENST00000423409 219 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 YWHAZP7-201ENST00000436906 631 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AL121871.1-201ENST00000443413 436 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 OFD1P3Y-201ENST00000453312 783 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC087808.1-201ENST00000520501 361 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 HSPE1P3-201ENST00000559254 309 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 MIR4637-201ENST00000582405 84 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 ZNF861P-201ENST00000588126 639 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC013444.2-201ENST00000603317 787 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC106791.2-201ENST00000604680 391 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC093673.2-201ENST00000609674 331 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AL138880.2-201ENST00000616214 239 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC091046.2-201ENST00000620775 665 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC120349.2-201ENST00000625002 298 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 MIR1322-201ENST00000638013 71 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AC009812.4-201ENST00000569134 1805 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.95□□□□□ -1.94
CDH9Q9ULB4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CDH9Q9ULB4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CDH9Q9ULB4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CDH9Q9ULB4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH9Q9ULB4 MIR135A2-201ENST00000384854 100 ntBASIC2.94□□□□□ -1.94
CDH9Q9ULB4 MIR9-1-201ENST00000385198 89 ntBASIC2.94□□□□□ -1.94
CDH9Q9ULB4 RNU2-42P-201ENST00000410697 113 ntBASIC2.94□□□□□ -1.94
CDH9Q9ULB4 RNA5SP21-201ENST00000410917 96 ntBASIC2.94□□□□□ -1.94
CDH9Q9ULB4 RNA5SP344-201ENST00000411081 104 ntBASIC2.94□□□□□ -1.94
CDH9Q9ULB4 AL592148.1-201ENST00000413568 445 ntBASIC2.94□□□□□ -1.94
CDH9Q9ULB4 RPL7P10-201ENST00000417407 739 ntBASIC2.94□□□□□ -1.94
CDH9Q9ULB4 MTND4P3-201ENST00000417829 541 ntBASIC2.94□□□□□ -1.94
CDH9Q9ULB4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH9Q9ULB4 RPL27AP8-201ENST00000424277 446 ntBASIC2.94□□□□□ -1.94
CDH9Q9ULB4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.94□□□□□ -1.94
CDH9Q9ULB4 AC007742.1-201ENST00000425789 329 ntBASIC2.94□□□□□ -1.94
CDH9Q9ULB4 AC093151.1-201ENST00000427711 313 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms