Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL513174.1-201ENST00000423182 629 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 GLRXP1-201ENST00000423261 334 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 RPS3AP44-201ENST00000425466 790 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 CYCSP35-201ENST00000451978 304 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 MTCYBP1-201ENST00000454315 1119 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AP000873.1-201ENST00000463987 400 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 RPL21P13-201ENST00000488305 481 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC106872.2-201ENST00000494303 480 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC096751.1-202ENST00000502691 1067 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 MTND2P33-201ENST00000506452 1031 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC022447.3-201ENST00000506865 495 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 CDC42P4-201ENST00000510507 563 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AL117351.2-201ENST00000513571 157 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 MTND4LP18-201ENST00000526864 291 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC005476.1-201ENST00000554427 397 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 MIR4528-201ENST00000577763 90 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 LLPHP1-201ENST00000603571 367 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC091805.2-201ENST00000603848 235 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC098614.4-201ENST00000607601 462 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC080013.4-201ENST00000607624 649 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AL589743.7-201ENST00000612637 233 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC138932.5-201ENST00000617759 563 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 EXOC5P1-201ENST00000510543 1969 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 SAGE4P-201ENST00000442271 3381 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AL021368.2-201ENST00000606125 5352 ntBASIC3.68□□□□□ -1.82
SIX4Q9UIU6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIX4Q9UIU6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 RNA5SP167-201ENST00000365461 116 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 RNU6-533P-201ENST00000384144 107 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 RNU6-1215P-201ENST00000384441 102 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 MIR1305-201ENST00000408300 86 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 RPS7P15-201ENST00000415804 584 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AC104651.1-201ENST00000427559 735 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AC010975.2-201ENST00000427781 588 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AC109583.1-201ENST00000432156 268 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 USP9YP7-201ENST00000436723 430 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AP000542.1-201ENST00000448473 371 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 USP9YP12-201ENST00000450481 570 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 USP9YP32-201ENST00000452432 430 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 HMGB3P30-201ENST00000457863 606 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 RPS4XP2-201ENST00000458402 793 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AP003392.2-201ENST00000527269 208 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 EIF1P4-201ENST00000572664 335 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 NDUFA8P1-201ENST00000605525 367 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AL390208.1-201ENST00000605885 644 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 RNA5SP108-201ENST00000605921 117 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 AC087241.4-201ENST00000612441 480 ntBASIC3.67□□□□□ -1.82
SIX4Q9UIU6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIX4Q9UIU6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 SNORD6-201ENST00000365444 73 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 RNU6-744P-201ENST00000365557 107 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 RNU6-1316P-201ENST00000384242 108 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 SNORA40.3-201ENST00000390964 122 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 RNA5SP44-201ENST00000410446 133 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 Z99755.1-201ENST00000414048 380 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AL451062.2-201ENST00000427515 271 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 HSPE1P28-201ENST00000443139 211 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms