Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC022306.3-201ENST00000619930 550 ntBASIC3.51□□□□□ -1.85
NPC1L1Q9UHC9 AC104985.3-201ENST00000623479 597 ntBASIC3.51□□□□□ -1.85
NPC1L1Q9UHC9 AL445984.1-201ENST00000637834 659 ntBASIC3.51□□□□□ -1.85
NPC1L1Q9UHC9 CRYM-AS1-204ENST00000637983 556 ntBASIC3.51□□□□□ -1.85
NPC1L1Q9UHC9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 GDI2P1-201ENST00000429312 1336 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 U8.9-201ENST00000365667 134 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 RNU6-629P-201ENST00000384061 103 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AL024474.1-201ENST00000404655 591 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AP000567.1-201ENST00000406413 156 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 C1DP1-201ENST00000426049 402 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AL590103.1-201ENST00000434488 307 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 RPL23AP74-201ENST00000437246 471 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AL590639.1-201ENST00000456484 337 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 snoU109.3-201ENST00000459477 145 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 SNORA48.10-201ENST00000516965 160 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AC008127.2-201ENST00000549925 1075 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AC069545.1-201ENST00000605671 358 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AC123767.1-202ENST00000620407 817 ntBASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NPC1L1Q9UHC9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC116096.1-201ENST00000566804 2314 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 RNA5SP295-201ENST00000362655 121 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 RNU6-730P-201ENST00000383954 104 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 SNORA26.7-201ENST00000391288 122 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 RNU2-28P-201ENST00000410457 189 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC006548.1-201ENST00000427470 102 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 HSFY7P-201ENST00000432672 318 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 GTF2IP7-202ENST00000436677 309 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 HSFY8P-201ENST00000437934 318 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AL513124.1-201ENST00000450410 614 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC079776.3-201ENST00000450665 370 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 HSFY5P-201ENST00000453726 309 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC128713.1-201ENST00000471495 306 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 RPL21P131-201ENST00000497298 483 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 MTCYBP37-201ENST00000510642 1133 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 MTCO3P44-201ENST00000510977 541 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC093752.1-206ENST00000511823 336 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 RNA5SP320-201ENST00000516263 124 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AP004371.1-201ENST00000525240 214 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 OR7K1P-201ENST00000546439 926 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 MTCO3P13-201ENST00000577757 781 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AL136370.1-201ENST00000608166 691 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC009318.4-201ENST00000620496 486 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC009269.6-201ENST00000621778 588 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 AC092184.1-201ENST00000625042 715 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 CR381572.1-201ENST00000625098 102 ntBASIC3.49□□□□□ -1.85
NPC1L1Q9UHC9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 AP000526.1-201ENST00000603308 1388 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 SNORD62.1-201ENST00000362541 86 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 SNORA51.6-201ENST00000384151 125 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 MIR506-201ENST00000384998 124 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 MIR27B-201ENST00000385129 97 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 SNORD65.1-201ENST00000390889 71 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 NPM1P11-201ENST00000417106 855 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 TOMM22P1-201ENST00000418578 312 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 AC007435.1-201ENST00000421086 415 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 AL354692.1-201ENST00000423044 315 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 AL035410.1-201ENST00000427409 427 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 RPL31P54-201ENST00000429803 370 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 RPL21P2-201ENST00000440049 481 ntBASIC3.48□□□□□ -1.85
NPC1L1Q9UHC9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms