Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 HMGB3P11-201ENST00000440127 604 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 EEF1A1P39-201ENST00000440791 250 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 RPL26P6-201ENST00000440913 438 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 SETP11-201ENST00000473027 690 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 RPL30P5-201ENST00000494923 336 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AC109445.1-201ENST00000512356 383 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 RNU6-528P-201ENST00000516926 100 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 DNAJC8P1-201ENST00000554535 372 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AC107294.3-201ENST00000609211 526 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AC027309.3-201ENST00000623419 351 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AC018692.3-201ENST00000623929 123 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 SCARNA15.3-201ENST00000626315 122 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 SCARNA4.1-201ENST00000628597 123 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 TPTE2P4-201ENST00000258589 1605 ntBASIC3.17□□□□□ -1.9
SPASTQ9UBP0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SPASTQ9UBP0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AC004972.1-201ENST00000623934 2209 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 Y_RNA.234-201ENST00000364409 97 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 U3.11-201ENST00000364476 212 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 Y_RNA.311-201ENST00000365068 96 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 ERHP2-201ENST00000402323 299 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AL139421.1-201ENST00000423010 169 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AL590383.1-201ENST00000428602 75 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AL353705.1-201ENST00000433468 480 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 CST9LP2-201ENST00000437612 320 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AL031313.1-201ENST00000448435 256 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 RSL24D1P3-201ENST00000449255 495 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AC093392.2-201ENST00000450682 337 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 SNORD121B-201ENST00000458838 81 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 RPL31P50-201ENST00000471002 296 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 RPL31P60-201ENST00000478450 367 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AC006445.2-201ENST00000510061 472 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AC079395.1-201ENST00000510981 262 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AC026801.2-201ENST00000515352 425 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 DEFB131D-201ENST00000526803 184 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AP002404.1-201ENST00000532005 451 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 HMGB1P14-201ENST00000557424 591 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 MIR3609-201ENST00000582661 80 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 HSPE1P7-201ENST00000604681 321 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AC004832.5-201ENST00000608677 401 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AL450472.3-201ENST00000615578 367 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AC090772.4-201ENST00000623599 362 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 AL022578.1-201ENST00000439330 1433 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.16□□□□□ -1.9
SPASTQ9UBP0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SPASTQ9UBP0 SDAD1P2-201ENST00000441308 2028 ntBASIC3.15□□□□□ -1.9
SPASTQ9UBP0 MTND5P24-201ENST00000438892 1767 ntBASIC3.15□□□□□ -1.9
SPASTQ9UBP0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.15□□□□□ -1.9
SPASTQ9UBP0 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
SPASTQ9UBP0 DDX43P2-201ENST00000604753 1354 ntBASIC3.15□□□□□ -1.9
SPASTQ9UBP0 OR1S2-201ENST00000302592 978 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 MIR148B-201ENST00000362252 99 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 RNU5A-1-201ENST00000362698 116 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 RNU6-799P-201ENST00000363567 107 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 RNU1-140P-201ENST00000365040 165 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SPASTQ9UBP0 RNU6-952P-201ENST00000391164 108 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 U3.26-201ENST00000391236 204 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 AC090774.1-201ENST00000435925 246 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.15□□□□□ -1.91
SPASTQ9UBP0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.15□□□□□ -1.91
SPASTQ9UBP0 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.15□□□□□ -1.91
SPASTQ9UBP0 ELOCP23-201ENST00000452014 332 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 MTND1P9-201ENST00000453775 944 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 MTND1P16-201ENST00000465177 898 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 RPS3AP14-201ENST00000483907 780 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.15□□□□□ -1.91
SPASTQ9UBP0 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.15□□□□□ -1.91
SPASTQ9UBP0 RNA5SP380-201ENST00000517190 98 ntBASIC3.15□□□□□ -1.91
SPASTQ9UBP0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SPASTQ9UBP0 COX6CP8-201ENST00000522620 226 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms