Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AC110994.2-201ENST00000635481 492 ntBASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HCN3Q9P1Z3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC008725.1-201ENST00000605123 2263 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 RNU5A-1-201ENST00000362698 116 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 RNU6-297P-201ENST00000384636 107 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AL445189.1-201ENST00000405722 338 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 MIR1183-201ENST00000408856 89 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 RPS15AP12-201ENST00000419498 388 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC006366.1-201ENST00000422002 759 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 BX890604.2-201ENST00000427883 474 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC083863.1-201ENST00000438811 231 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 MTCO2P7-201ENST00000446518 666 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 ELOCP30-201ENST00000447108 299 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 SNORD42A-201ENST00000459584 64 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 LARP1BP2-201ENST00000486594 519 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 ARL2BPP4-201ENST00000506854 471 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC114797.1-201ENST00000514003 728 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC107934.1-201ENST00000522215 217 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 ERHP1-201ENST00000523006 310 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 DEFB108A-201ENST00000530110 222 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AP003122.4-201ENST00000530980 758 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 MIR3118-1-201ENST00000581787 76 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AF038458.1-201ENST00000588406 262 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AL451086.1-201ENST00000605596 223 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 MIR92B-201ENST00000607575 96 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 BX664608.1-201ENST00000610519 487 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC245517.5-201ENST00000611529 162 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC011939.3-201ENST00000613686 466 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 TUG1_2.1-201ENST00000614234 87 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC138932.5-201ENST00000617759 563 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AL354798.1-201ENST00000622505 329 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 FP236240.3-201ENST00000623061 327 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC091953.2-201ENST00000623979 160 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC099654.13-201ENST00000639774 207 ntBASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HCN3Q9P1Z3 AC093010.3-201ENST00000570269 15214 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 RNU6-223P-201ENST00000362830 107 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 SNORA23-201ENST00000365128 182 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 RNY3P13-201ENST00000365542 102 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AL109755.1-201ENST00000401791 649 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 RHEBP3-201ENST00000411920 351 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 ELOCP17-201ENST00000414751 326 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 MORF4L1P6-201ENST00000418771 268 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 VN1R108P-201ENST00000431580 830 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 MTND6P13-201ENST00000443510 523 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AL162389.1-201ENST00000449233 177 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 MTCO2P18-201ENST00000457151 658 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 GMPSP1-201ENST00000514075 579 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 Y_RNA.672-201ENST00000516289 104 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 RNA5SP468-201ENST00000516782 93 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC135279.1-201ENST00000543493 504 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 HSPE1P5-201ENST00000561489 272 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 MIR5685-201ENST00000579080 79 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 AC093227.2-201ENST00000589357 285 ntBASIC3.68□□□□□ -1.82
HCN3Q9P1Z3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms