Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MTND4LP20-201ENST00000402379 270 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 MIR320C1-201ENST00000408566 88 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 RPL36AP36-201ENST00000418616 301 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AL365184.2-201ENST00000431139 435 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC010153.1-201ENST00000432862 727 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC098826.1-201ENST00000433943 471 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 MTCYBP45-201ENST00000435243 565 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 SNRPEP7-201ENST00000438350 220 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AL512286.1-201ENST00000439244 400 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 HSPE1P28-201ENST00000443139 211 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 ARPC3P5-201ENST00000448802 534 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 MTND4LP3-201ENST00000468320 276 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC146507.1-201ENST00000468335 354 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 RPL7P5-201ENST00000471472 736 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 RPL21P129-201ENST00000491732 478 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC023424.2-201ENST00000493479 777 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC082651.2-201ENST00000496833 166 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC006499.5-201ENST00000505037 514 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC093677.1-201ENST00000514414 678 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 Y_RNA.695-201ENST00000516715 107 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC135279.1-201ENST00000543493 504 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 OR6C7P-201ENST00000547875 934 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC012414.6-201ENST00000568241 401 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AP001004.1-201ENST00000582468 324 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 MIR548AB-201ENST00000584917 84 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC067852.3-201ENST00000589177 561 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC119751.7-201ENST00000600494 245 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AL133393.1-201ENST00000603277 287 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC239868.4-201ENST00000608318 671 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC004009.2-201ENST00000623016 728 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 AC006927.3-201ENST00000638789 384 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 NUP58P1-201ENST00000502546 1738 ntBASIC3.19□□□□□ -1.9
NDE1Q9NXR1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.19□□□□□ -1.9
NDE1Q9NXR1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 SAGE4P-201ENST00000442271 3381 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 SNORD9-201ENST00000362566 104 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 Y_RNA.77-201ENST00000362962 107 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 RNU6-501P-201ENST00000364072 100 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 RPS3AP26-201ENST00000398259 784 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 OFD1P18Y-201ENST00000420889 959 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 Z99497.1-201ENST00000421282 135 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 CYCSP46-201ENST00000423569 204 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AC093151.1-201ENST00000427711 313 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AL589823.1-201ENST00000429577 183 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AL590233.1-201ENST00000430017 456 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 RPL23AP33-201ENST00000442301 452 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 RPL21P89-201ENST00000444021 467 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 VN1R17P-201ENST00000472048 1090 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AC093809.1-201ENST00000509155 340 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AC108064.1-201ENST00000513791 460 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AC034159.1-201ENST00000513885 583 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 RNA5SP216-201ENST00000516111 123 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 RN7SKP116-201ENST00000516902 319 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 COX6CP8-201ENST00000522620 226 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 HSPA8P13-201ENST00000523715 472 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 OR4R3P-201ENST00000525084 838 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 OR8L1P-201ENST00000534005 955 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms