Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 HMGN1P24-201ENST00000412282 298 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC099548.1-201ENST00000421443 426 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AL365496.1-201ENST00000426885 215 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC005326.1-201ENST00000429197 123 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 RPL23AP83-201ENST00000434984 473 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 BX322784.1-201ENST00000455793 1077 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 RPS4XP2-201ENST00000458402 793 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 ACTG1P13-201ENST00000486987 1043 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC110794.1-201ENST00000505816 425 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 RNU6-714P-201ENST00000516963 103 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AL132857.1-201ENST00000555180 708 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC015917.1-201ENST00000579654 510 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 MIR5195-201ENST00000583555 115 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AL162713.1-201ENST00000604480 262 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 AC104763.3-201ENST00000613765 618 ntBASIC3.09□□□□□ -1.91
HPF1Q9NWY4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.09□□□□□ -1.91
HPF1Q9NWY4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HPF1Q9NWY4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.09□□□□□ -1.92
HPF1Q9NWY4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
HPF1Q9NWY4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AL672167.1-206ENST00000356293 943 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 MIR148B-201ENST00000362252 99 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 RNU6-97P-201ENST00000363387 104 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 RNU6-741P-201ENST00000383889 107 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 Y_RNA.408-201ENST00000383987 102 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 MIR887-201ENST00000401258 79 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 RNA5SP107-201ENST00000411358 122 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 TIMM9P2-201ENST00000419324 266 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC245291.1-201ENST00000419501 328 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC005300.1-201ENST00000428401 373 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC006028.1-201ENST00000438379 402 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AL714022.1-201ENST00000439897 151 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC009296.1-201ENST00000443146 155 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 BX510359.1-201ENST00000456973 237 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 SNORD121B-201ENST00000458838 81 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC116337.2-201ENST00000477662 156 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 HSPE1P20-201ENST00000538133 289 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 OR6C7P-201ENST00000547875 934 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AL157394.1-201ENST00000562983 1224 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC067852.3-201ENST00000589177 561 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AL356321.1-201ENST00000621360 228 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC110801.1-201ENST00000623590 212 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 AC017071.1-201ENST00000564407 2204 ntBASIC3.08□□□□□ -1.92
HPF1Q9NWY4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HPF1Q9NWY4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
HPF1Q9NWY4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HPF1Q9NWY4 AL356274.2-201ENST00000624379 3752 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
HPF1Q9NWY4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HPF1Q9NWY4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HPF1Q9NWY4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HPF1Q9NWY4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HPF1Q9NWY4 AL161781.1-201ENST00000354277 403 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 RNU6-359P-201ENST00000365466 108 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HPF1Q9NWY4 MIR491-201ENST00000384877 84 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 TPMTP3-201ENST00000411928 735 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 RAP1BP1-201ENST00000412709 553 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 BX682237.1-201ENST00000415016 335 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 AC009414.1-201ENST00000427200 443 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 Z82210.1-201ENST00000440037 231 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 DDX3P2-201ENST00000446138 111 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 AC002381.1-201ENST00000447049 280 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 MTCO2P25-201ENST00000447065 681 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 SEM1P1-201ENST00000506694 209 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 RNY4P37-201ENST00000516225 96 ntBASIC3.07□□□□□ -1.92
HPF1Q9NWY4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.07□□□□□ -1.92
HPF1Q9NWY4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.07□□□□□ -1.92
HPF1Q9NWY4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms