Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
KIAA1549Q9HCM3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AL512646.1-201ENST00000269395 1077 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 RNU6-173P-201ENST00000364215 104 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 RNA5SP138-201ENST00000365098 114 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 RNU6-76P-201ENST00000384060 104 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 RNU6-837P-201ENST00000391056 108 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 SNORA40.18-201ENST00000391200 128 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC092436.1-201ENST00000506450 503 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC105914.1-201ENST00000511798 226 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 PRELID2P1-201ENST00000552837 301 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC138473.1-201ENST00000605717 526 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AL450472.3-201ENST00000615578 367 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC006249.1-201ENST00000621223 471 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 ZNF720P1-201ENST00000562403 1939 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 RNA5SP393-201ENST00000363423 117 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 RPS15AP7-201ENST00000439294 405 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC090543.1-201ENST00000492168 485 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC025459.1-201ENST00000504072 156 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC068339.2-201ENST00000534395 618 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC121758.2-201ENST00000553271 193 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC002984.1-201ENST00000591692 448 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AC068790.3-201ENST00000602988 553 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AL133507.1-201ENST00000605269 557 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 AL110115.1-201ENST00000614396 364 ntBASIC1.85□□□□□ -2.11
KIAA1549Q9HCM3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 MIR767-201ENST00000390228 109 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 MTATP6P31-201ENST00000406985 692 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 AF274854.1-201ENST00000413236 615 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 RPS15AP40-201ENST00000419621 391 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 AC097499.1-201ENST00000444277 208 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 RPL23AP7-203ENST00000449021 469 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 ACTR3BP3-201ENST00000565577 979 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 AC103810.1-201ENST00000579873 453 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 AC011494.1-201ENST00000596454 237 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 DUXAP4-201ENST00000603046 613 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 YWHAEP7-203ENST00000622054 312 ntBASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.84□□□□□ -2.11
KIAA1549Q9HCM3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
KIAA1549Q9HCM3 RPS4XP3-201ENST00000398541 413 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AC005005.2-201ENST00000420779 380 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 RPL7P30-201ENST00000420888 709 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 MTCO3P30-201ENST00000426425 670 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AL590762.3-201ENST00000436372 640 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 SDR42E1P3-201ENST00000438345 502 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 HMGB1P47-201ENST00000511281 589 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 LRRC37A5P-203ENST00000580181 585 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AL355812.1-201ENST00000603215 216 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 RPP40P2-201ENST00000603596 712 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 KATNBL1P1-201ENST00000605192 748 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AC010680.1-201ENST00000590024 3590 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 SNORA80E-201ENST00000384744 137 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 RNA5SP213-201ENST00000391031 106 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 MIR1303-201ENST00000408625 86 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 RNA5SP38-201ENST00000410750 119 ntBASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.83□□□□□ -2.12
KIAA1549Q9HCM3 FO393419.3-201ENST00000428741 282 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms