Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AL359385.1-201ENST00000456509 365 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC013267.1-201ENST00000458227 267 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 SNORD108-201ENST00000459332 71 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 RPS4XP10-201ENST00000465034 731 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 MTCO3P38-201ENST00000468910 766 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AL121769.1-201ENST00000469473 401 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 MTAPP1-201ENST00000489154 819 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC069499.1-201ENST00000489433 509 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 HMGB1P29-201ENST00000505659 499 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC026726.1-201ENST00000512859 601 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 RNU6-27P-201ENST00000516146 107 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC234778.2-201ENST00000566241 354 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC092325.1-201ENST00000566449 554 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AL355812.1-201ENST00000603215 216 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC011468.4-201ENST00000603942 409 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 OR6R2P-201ENST00000609216 300 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 MIR6075-201ENST00000620782 95 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 MIR6863-201ENST00000636112 90 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC010149.2-201ENST00000637608 315 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 AC090337.1-201ENST00000579651 2074 ntBASIC4.07□□□□□ -1.76
USP29Q9HBJ7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.07□□□□□ -1.76
USP29Q9HBJ7 RNU6-989P-201ENST00000362756 107 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 MTCO3P40-201ENST00000392516 676 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 RPL23AP32-201ENST00000395315 459 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 CCNG1P1-201ENST00000406783 885 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 BTF3P7-201ENST00000407097 488 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 RHEBP3-201ENST00000411920 351 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC092832.1-201ENST00000422934 400 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC104850.1-201ENST00000435940 476 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 MTND4P18-201ENST00000447010 465 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 MTCO3P20-201ENST00000454926 688 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 RPS20P24-201ENST00000457473 361 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC021382.1-201ENST00000483523 359 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC106872.2-201ENST00000494303 480 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC019235.1-201ENST00000503847 207 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 COX7A2P2-201ENST00000505291 250 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 ARL2BPP6-201ENST00000512757 439 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 RNU1-45P-201ENST00000517191 141 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC107934.1-201ENST00000522215 217 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC091516.1-201ENST00000549191 703 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC107954.1-201ENST00000565906 727 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AL356432.3-201ENST00000568952 465 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 MIR4444-1-201ENST00000581696 74 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 MIR4444-2-201ENST00000584390 74 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AL606490.9-201ENST00000603331 271 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC245014.2-201ENST00000603689 287 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC246785.4-201ENST00000605374 287 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AP002360.4-201ENST00000606980 481 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC090970.3-201ENST00000612566 866 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC007014.2-201ENST00000615581 479 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AL356321.1-201ENST00000621360 228 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AL359880.1-201ENST00000621879 266 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC009268.2-201ENST00000621925 457 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC091953.2-201ENST00000623979 160 ntBASIC4.06□□□□□ -1.76
USP29Q9HBJ7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
USP29Q9HBJ7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP29Q9HBJ7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms