Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC024589.1-201ENST00000512207 263 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 TRMT10BP1-201ENST00000519377 943 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 MTCO1P49-201ENST00000523429 802 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC103843.2-201ENST00000530523 682 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 MTND3P12-201ENST00000559068 328 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC022916.3-201ENST00000592961 742 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC090186.1-201ENST00000605991 572 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC092354.2-201ENST00000607786 514 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC103710.4-201ENST00000609301 899 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 MIR6875-201ENST00000617506 72 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 MIR6810-201ENST00000622701 70 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC087359.1-201ENST00000508335 1740 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC011477.1-204ENST00000623416 1325 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 MTND4P16-201ENST00000466108 1367 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-462P-201ENST00000362659 105 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-97P-201ENST00000363387 104 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 U8.11-201ENST00000384699 133 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 U8.12-201ENST00000384701 133 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AL356421.1-201ENST00000403255 413 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 MTCO1P39-201ENST00000426148 480 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AL593851.1-201ENST00000426171 157 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC091390.1-201ENST00000433904 331 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 MTCO1P27-201ENST00000448269 226 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 RPL23AP31-201ENST00000456160 467 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 U8.18-201ENST00000459285 133 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 PRELID3BP5-201ENST00000508612 460 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 MTCO2P32-201ENST00000514865 403 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 MTND5P4-201ENST00000514978 288 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC090888.2-201ENST00000559765 1144 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 BNIP3P5-201ENST00000562290 498 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 ZNF415P1-201ENST00000582279 1166 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-88P-201ENST00000606801 100 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC097468.3-201ENST00000607956 456 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 TUG1_1.1-201ENST00000610654 145 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AL355810.1-201ENST00000614629 552 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AL731566.2-201ENST00000618971 317 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC091304.6-201ENST00000619761 202 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AL360181.4-201ENST00000621752 134 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC131159.1-201ENST00000621854 213 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AC007671.2-201ENST00000637344 619 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 AL513185.3-201ENST00000433335 1300 ntBASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VIPAS39Q9H9C1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AL391994.1-201ENST00000254724 282 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AL161781.1-201ENST00000354277 403 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-50P-201ENST00000362356 103 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 RNA5SP88-201ENST00000365560 109 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 BEND7P1-201ENST00000422058 457 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AL035407.1-201ENST00000429211 571 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 OR4K11P-201ENST00000431829 904 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms