Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 C4BPAP1-201ENST00000415474 1893 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS11Q9H270 AC027287.1-201ENST00000553115 1453 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS11Q9H270 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
VPS11Q9H270 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS11Q9H270 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS11Q9H270 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS11Q9H270 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS11Q9H270 AC067945.1-201ENST00000342609 618 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 MIR448-201ENST00000362131 111 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 RNU6-28P-201ENST00000362378 107 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 RNA5SP191-201ENST00000362585 102 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 RNA5SP305-201ENST00000362665 119 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 RNU6-223P-201ENST00000362830 107 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 MT-TG-201ENST00000387429 68 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 RNU6-510P-201ENST00000391239 108 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 RPS20P2-201ENST00000402520 389 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 MIR548F4-201ENST00000408515 105 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 MIR320C1-201ENST00000408566 88 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 RN7SKP266-201ENST00000410232 287 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 SRIP2-201ENST00000428470 166 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS11Q9H270 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS11Q9H270 AC002381.1-201ENST00000447049 280 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 OR1H1P-201ENST00000448731 937 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 MTND1P9-201ENST00000453775 944 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 RNU6-261P-201ENST00000459506 102 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 S100A11P1-201ENST00000477525 312 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AL135752.1-201ENST00000479477 471 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS11Q9H270 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 RNU6-1314P-201ENST00000517139 104 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS11Q9H270 AP001880.2-201ENST00000538233 448 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS11Q9H270 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS11Q9H270 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS11Q9H270 POLR3GP2-201ENST00000588366 668 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AC011487.3-201ENST00000593607 453 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS11Q9H270 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS11Q9H270 AC010591.1-201ENST00000603941 649 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AC013244.1-201ENST00000604279 193 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AC010201.1-201ENST00000605051 540 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AL161734.1-201ENST00000609720 557 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AC084781.2-201ENST00000615568 161 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AL138721.1-201ENST00000616756 179 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 AL596245.1-201ENST00000618994 362 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS11Q9H270 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS11Q9H270 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS11Q9H270 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS11Q9H270 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS11Q9H270 MAPK10-263ENST00000641052 4307 ntBASIC4.57□□□□□ -1.68
VPS11Q9H270 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS11Q9H270 MTCO1P12-201ENST00000414273 1543 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VPS11Q9H270 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS11Q9H270 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VPS11Q9H270 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
VPS11Q9H270 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
VPS11Q9H270 RNU6-343P-201ENST00000364709 104 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS11Q9H270 AL133412.1-201ENST00000380194 2992 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 MIR1302-3-201ENST00000408128 138 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 RN7SKP267-201ENST00000410381 285 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 RNU4-78P-201ENST00000410940 126 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS11Q9H270 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS11Q9H270 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS11Q9H270 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS11Q9H270 HMGB1P15-201ENST00000453854 435 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 HIGD1AP8-201ENST00000453927 274 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 ISCUP1-201ENST00000454451 448 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 AC025445.1-201ENST00000502728 300 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 SCARNA22-201ENST00000503991 125 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 AC010587.1-201ENST00000505809 469 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 HMGB3P15-201ENST00000507326 574 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 MTCO2P24-201ENST00000515611 426 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 RNA5SP154-201ENST00000516193 111 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 RN7SKP256-201ENST00000517201 314 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 AP003122.3-201ENST00000526316 255 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 AC021006.3-201ENST00000530771 192 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 AC008033.2-201ENST00000542626 177 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.56□□□□□ -1.68
VPS11Q9H270 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS11Q9H270 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS11Q9H270 AC009117.1-201ENST00000563948 554 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS11Q9H270 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS11Q9H270 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS11Q9H270 AC092807.2-201ENST00000609367 243 ntBASIC4.56□□□□□ -1.68
VPS11Q9H270 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS11Q9H270 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS11Q9H270 INTS6P1-201ENST00000504674 2530 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms