Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.58□□□□□ -2
FOXC2Q99958 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.58□□□□□ -2
FOXC2Q99958 FDX1P2-201ENST00000450769 375 ntBASIC2.58□□□□□ -2
FOXC2Q99958 MTATP6P14-201ENST00000455189 673 ntBASIC2.58□□□□□ -2
FOXC2Q99958 SUMO2P2-201ENST00000456482 255 ntBASIC2.58□□□□□ -2
FOXC2Q99958 RPL7P5-201ENST00000471472 736 ntBASIC2.58□□□□□ -2
FOXC2Q99958 SETP11-201ENST00000473027 690 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AC126389.1-201ENST00000477436 290 ntBASIC2.58□□□□□ -2
FOXC2Q99958 HIGD1AP13-201ENST00000509878 289 ntBASIC2.58□□□□□ -2
FOXC2Q99958 RNU6-1261P-201ENST00000517194 104 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AP001207.2-201ENST00000519490 539 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.58□□□□□ -2
FOXC2Q99958 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.58□□□□□ -2
FOXC2Q99958 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.58□□□□□ -2
FOXC2Q99958 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.58□□□□□ -2
FOXC2Q99958 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.58□□□□□ -2
FOXC2Q99958 CR383656.7-201ENST00000548164 174 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.58□□□□□ -2
FOXC2Q99958 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.58□□□□□ -2
FOXC2Q99958 OR4H12P-201ENST00000556269 907 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AC009097.3-201ENST00000563557 1018 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.58□□□□□ -2
FOXC2Q99958 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.58□□□□□ -2
FOXC2Q99958 GLUD1P4-201ENST00000590914 418 ntBASIC2.58□□□□□ -2
FOXC2Q99958 VN1R90P-201ENST00000595717 726 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AL031176.1-201ENST00000604554 466 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AC109454.4-201ENST00000623411 649 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.58□□□□□ -2
FOXC2Q99958 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.58□□□□□ -2
FOXC2Q99958 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.58□□□□□ -2
FOXC2Q99958 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.58□□□□□ -2
FOXC2Q99958 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
FOXC2Q99958 ELF2P3-201ENST00000445099 1506 ntBASIC2.58□□□□□ -2
FOXC2Q99958 MTND5P27-201ENST00000428871 1720 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AC009812.4-201ENST00000569134 1805 ntBASIC2.57□□□□□ -2
FOXC2Q99958 FAM35CP-201ENST00000554755 2470 ntBASIC2.57□□□□□ -2
FOXC2Q99958 MIR504-201ENST00000385065 83 ntBASIC2.57□□□□□ -2
FOXC2Q99958 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.57□□□□□ -2
FOXC2Q99958 RNA5SP252-201ENST00000391131 119 ntBASIC2.57□□□□□ -2
FOXC2Q99958 RPL7P27-201ENST00000403775 720 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AL356968.1-201ENST00000416622 474 ntBASIC2.57□□□□□ -2
FOXC2Q99958 PTP4A1P7-201ENST00000423476 514 ntBASIC2.57□□□□□ -2
FOXC2Q99958 SEPT7P5-201ENST00000434048 306 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.57□□□□□ -2
FOXC2Q99958 AL121871.1-201ENST00000443413 436 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AC010095.1-201ENST00000443543 144 ntBASIC2.57□□□□□ -2
FOXC2Q99958 RAC1P7-201ENST00000445367 377 ntBASIC2.57□□□□□ -2
FOXC2Q99958 MTCYBP11-201ENST00000447254 1109 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.57□□□□□ -2
FOXC2Q99958 AL031183.1-201ENST00000457667 207 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AC008427.1-201ENST00000503102 655 ntBASIC2.57□□□□□ -2
FOXC2Q99958 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
FOXC2Q99958 AC068657.1-201ENST00000520807 306 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.57□□□□□ -2
FOXC2Q99958 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.57□□□□□ -2
FOXC2Q99958 AC104417.1-201ENST00000523974 751 ntBASIC2.57□□□□□ -2
FOXC2Q99958 MTCO3P15-201ENST00000526563 574 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AP001189.2-201ENST00000527320 189 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.57□□□□□ -2
FOXC2Q99958 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.57□□□□□ -2
FOXC2Q99958 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.57□□□□□ -2
FOXC2Q99958 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.57□□□□□ -2
FOXC2Q99958 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.57□□□□□ -2
FOXC2Q99958 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.57□□□□□ -2
FOXC2Q99958 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.57□□□□□ -2
FOXC2Q99958 BNIP3P27-201ENST00000599991 412 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AL606834.3-201ENST00000602615 496 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AC013444.2-201ENST00000603317 787 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AC100793.4-201ENST00000613683 429 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.57□□□□□ -2
FOXC2Q99958 AC010975.3-201ENST00000618727 978 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AP003476.1-201ENST00000623984 516 ntBASIC2.57□□□□□ -2
FOXC2Q99958 AC004808.1-201ENST00000627671 721 ntBASIC2.57□□□□□ -2
FOXC2Q99958 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.57□□□□□ -2
FOXC2Q99958 API5P2-201ENST00000397055 1498 ntBASIC2.57□□□□□ -2
FOXC2Q99958 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
FOXC2Q99958 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FOXC2Q99958 RNU6-1027P-201ENST00000383998 107 ntBASIC2.56□□□□□ -2
FOXC2Q99958 MIR135A2-201ENST00000384854 100 ntBASIC2.56□□□□□ -2
FOXC2Q99958 RNU6-298P-201ENST00000390888 96 ntBASIC2.56□□□□□ -2
FOXC2Q99958 DPRXP1-201ENST00000426312 460 ntBASIC2.56□□□□□ -2
FOXC2Q99958 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.56□□□□□ -2
FOXC2Q99958 AC108734.1-201ENST00000439549 399 ntBASIC2.56□□□□□ -2
FOXC2Q99958 AC093155.1-201ENST00000440164 826 ntBASIC2.56□□□□□ -2
FOXC2Q99958 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.56□□□□□ -2
FOXC2Q99958 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.56□□□□□ -2
FOXC2Q99958 AC104982.1-201ENST00000478775 574 ntBASIC2.56□□□□□ -2
FOXC2Q99958 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.56□□□□□ -2
FOXC2Q99958 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.56□□□□□ -2
FOXC2Q99958 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.56□□□□□ -2
FOXC2Q99958 SCGB1D5P-201ENST00000515134 247 ntBASIC2.56□□□□□ -2
FOXC2Q99958 AC104986.1-201ENST00000517978 436 ntBASIC2.56□□□□□ -2
FOXC2Q99958 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.56□□□□□ -2
FOXC2Q99958 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.56□□□□□ -2
FOXC2Q99958 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.56□□□□□ -2
FOXC2Q99958 AC125611.1-201ENST00000549563 229 ntBASIC2.56□□□□□ -2
FOXC2Q99958 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.56□□□□□ -2
FOXC2Q99958 AC087897.1-201ENST00000550134 156 ntBASIC2.56□□□□□ -2
FOXC2Q99958 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.56□□□□□ -2
FOXC2Q99958 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms