Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.07□□□□□ -1.92
SSX3Q99909 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.07□□□□□ -1.92
SSX3Q99909 BNIP3P23-201ENST00000599655 511 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AC021171.1-201ENST00000603137 706 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AP000811.1-201ENST00000603803 651 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 MIR92B-201ENST00000607575 96 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AL355493.4-201ENST00000618530 292 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 MIR6130-201ENST00000619419 109 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AL031667.3-201ENST00000620124 655 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AC008443.7-201ENST00000622195 246 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AC039056.2-201ENST00000622261 511 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 AC017037.3-201ENST00000625016 472 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 MTND5P7-201ENST00000413558 1798 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SSX3Q99909 AC233263.6-201ENST00000631132 1963 ntBASIC3.07□□□□□ -1.92
SSX3Q99909 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
SSX3Q99909 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
SSX3Q99909 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSX3Q99909 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSX3Q99909 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX3Q99909 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSX3Q99909 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX3Q99909 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
SSX3Q99909 RNU5A-1-201ENST00000362698 116 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 SNORA73.2-201ENST00000364946 201 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 Y_RNA.302-201ENST00000364997 102 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SSX3Q99909 MIR670-201ENST00000390142 98 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SSX3Q99909 SOD2P1-201ENST00000396543 562 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 API5P2-201ENST00000397055 1498 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX3Q99909 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSX3Q99909 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX3Q99909 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.06□□□□□ -1.92
SSX3Q99909 RAB9AP3-201ENST00000412737 573 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 NDUFB4P5-201ENST00000415445 361 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX3Q99909 MTND1P20-201ENST00000430341 950 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 UBE2V1P13-201ENST00000436983 439 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 FTH1P1-201ENST00000437933 532 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AC091862.1-201ENST00000438016 1100 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AL606662.1-201ENST00000445763 553 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 VN1R34P-201ENST00000447387 883 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AC125238.1-201ENST00000448842 249 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 RAB9AP1-201ENST00000449393 573 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX3Q99909 OR6C5P-201ENST00000452388 923 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 MTND1P9-201ENST00000453775 944 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AC010099.1-201ENST00000455434 375 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX3Q99909 RPS29P12-201ENST00000460178 152 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AC022447.3-201ENST00000506865 495 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 ARL4AP2-201ENST00000507378 601 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX3Q99909 SCARNA14-201ENST00000516903 136 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSX3Q99909 AC068587.4-201ENST00000533893 186 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX3Q99909 AC005832.2-201ENST00000538921 1430 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 LRRC34P1-201ENST00000542742 915 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.06□□□□□ -1.92
SSX3Q99909 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX3Q99909 ZNF321P-202ENST00000550843 495 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AC023161.2-201ENST00000551218 780 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 DUXAP6-201ENST00000553858 601 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX3Q99909 MIR4738-201ENST00000579134 87 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 MIR3609-201ENST00000582661 80 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX3Q99909 MIR4506-201ENST00000584693 77 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AC097468.3-201ENST00000607956 456 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX3Q99909 AL392048.1-201ENST00000613946 534 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AP002791.1-201ENST00000623291 381 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX3Q99909 PCMTD1P7-201ENST00000634506 357 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SSX3Q99909 AC073073.2-201ENST00000609827 2578 ntBASIC3.06□□□□□ -1.92
SSX3Q99909 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.05□□□□□ -1.92
SSX3Q99909 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSX3Q99909 RNA5SP124-201ENST00000362739 110 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SSX3Q99909 U3.20-201ENST00000390909 217 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 RAP1BP1-201ENST00000412709 553 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.05□□□□□ -1.92
SSX3Q99909 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX3Q99909 AC006989.1-201ENST00000427212 131 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX3Q99909 AC090774.1-201ENST00000435925 246 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 RSU1P2-202ENST00000437884 485 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AC009969.1-201ENST00000438726 172 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX3Q99909 AL133162.1-201ENST00000463228 453 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AC072039.1-201ENST00000477611 581 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.05□□□□□ -1.92
SSX3Q99909 MTCYBP35-201ENST00000503630 1137 ntBASIC3.05□□□□□ -1.92
SSX3Q99909 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX3Q99909 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms