Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AC126755.2-208ENST00000327792 462 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AC138969.1-213ENST00000331436 462 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 Y_RNA.153-201ENST00000363615 91 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 Y_RNA.257-201ENST00000364596 102 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 Y_RNA.399-201ENST00000383955 105 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 Y_RNA.428-201ENST00000384078 102 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 Y_RNA.489-201ENST00000384410 101 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 NDUFS5P1-201ENST00000405668 289 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AL583834.1-201ENST00000406943 343 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 RNU6-1050P-201ENST00000410388 107 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 GPS2P1-201ENST00000411761 986 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 RPL31P2-201ENST00000413849 377 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AC099336.2-201ENST00000422457 254 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 RPS26P47-201ENST00000427219 348 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 COX6CP13-201ENST00000428703 226 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 RPL7AP61-201ENST00000443410 636 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 GSTA11P-201ENST00000452866 669 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AC099560.2-201ENST00000457554 255 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 RN7SL432P-201ENST00000484057 298 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 RNU6-470P-201ENST00000515954 104 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 RNU6-685P-201ENST00000517088 95 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AC234771.5-201ENST00000600161 514 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AL138889.2-201ENST00000603883 242 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AC025588.3-201ENST00000604182 274 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AL391358.1-201ENST00000605342 190 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AC018462.2-201ENST00000605375 395 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 DUSP12P1-201ENST00000612874 516 ntBASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC85AQ96PX6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AC079741.1-201ENST00000321498 212 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 RNU6-238P-201ENST00000363313 106 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 RNVU1-3-201ENST00000364313 161 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AL109755.1-201ENST00000401791 649 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 RN7SKP100-201ENST00000411258 284 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AC245028.1-201ENST00000423259 256 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AL353597.2-202ENST00000434901 373 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 DYNLL1P5-201ENST00000467158 270 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AP002812.1-201ENST00000495378 474 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 SNORD116.3-201ENST00000517176 78 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AC105031.1-201ENST00000518550 476 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 RAB9BP1-201ENST00000519581 626 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AC100870.1-201ENST00000522035 505 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AC090115.3-201ENST00000553218 849 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 NDUFB4P11-201ENST00000560510 395 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AC005357.1-201ENST00000588399 301 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 AC116667.1-201ENST00000604855 2072 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 MIR6780A-201ENST00000615089 68 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 FAM157A-202ENST00000615155 405 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC85AQ96PX6 CDC27P3-201ENST00000635418 1910 ntBASIC6.11□□□□□ -1.43
CCDC85AQ96PX6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC85AQ96PX6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CCDC85AQ96PX6 AC109446.4-201ENST00000623235 2755 ntBASIC6.11□□□□□ -1.43
CCDC85AQ96PX6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.11□□□□□ -1.43
CCDC85AQ96PX6 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.11□□□□□ -1.43
CCDC85AQ96PX6 RNU1-32P-201ENST00000363937 159 ntBASIC6.11□□□□□ -1.43
CCDC85AQ96PX6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCDC85AQ96PX6 RNU6-754P-201ENST00000391166 107 ntBASIC6.11□□□□□ -1.43
CCDC85AQ96PX6 RPLP0P7-201ENST00000416050 667 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms