Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNU6-952P-201ENST00000391164 108 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 RPS3AP26-201ENST00000398259 784 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AC106883.1-201ENST00000418805 562 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AC012498.1-201ENST00000424037 437 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 ATP5F1P1-201ENST00000433775 569 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 USP9YP24-201ENST00000434374 697 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 USP9YP17-201ENST00000444617 696 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 NANOGNBP1-201ENST00000448444 480 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 MTND1P16-201ENST00000465177 898 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 RPL31P50-201ENST00000471002 296 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 UBE2V1P12-201ENST00000503954 474 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 VN1R104P-201ENST00000505115 1009 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AC022483.1-201ENST00000514020 567 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 SNORA70.16-201ENST00000516390 95 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AC009812.2-201ENST00000517657 457 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 DEFB108D-201ENST00000527787 222 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 MTND3P19-201ENST00000603825 345 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AC009220.3-201ENST00000604318 586 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AC008962.1-201ENST00000605729 304 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 RNU4-5P-201ENST00000607255 135 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AC004832.5-201ENST00000608677 401 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF560Q96MR9 FAM35CP-201ENST00000554755 2470 ntBASIC3.27□□□□□ -1.89
ZNF560Q96MR9 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC073325.2-201ENST00000339545 159 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 Y_RNA.192-201ENST00000363977 102 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 CCDC58P2-201ENST00000417131 366 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 RPL7P46-201ENST00000425129 740 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 RPL21P40-201ENST00000428586 483 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC024082.2-201ENST00000434771 238 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 RPL23AP22-201ENST00000437556 453 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC140076.1-201ENST00000449897 361 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 RPL21P134-201ENST00000453468 483 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 RNA5SP310-201ENST00000459084 116 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 RPS26P21-201ENST00000475397 348 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC108860.1-201ENST00000484521 383 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 DSTNP2-201ENST00000504533 515 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC017037.2-201ENST00000513850 890 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC023813.2-201ENST00000564321 469 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC055876.1-202ENST00000567053 138 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AL022578.1-201ENST00000439330 1433 ntBASIC3.26□□□□□ -1.89
ZNF560Q96MR9 AC004972.1-201ENST00000623934 2209 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AL139421.1-201ENST00000423010 169 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 NANOGP5-201ENST00000424456 877 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AC092648.1-201ENST00000425870 423 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 MTATP6P4-201ENST00000427725 675 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AC009969.1-201ENST00000438726 172 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 S100A11P2-201ENST00000467589 312 ntBASIC3.25□□□□□ -1.89
ZNF560Q96MR9 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.25□□□□□ -1.89
ZNF560Q96MR9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms