Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AL606489.2-201ENST00000433886 234 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC069285.2-201ENST00000440210 275 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 DDX3P2-201ENST00000446138 111 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 RPL36AP13-201ENST00000457490 317 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 RNU6-420P-201ENST00000458780 107 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 RN7SL585P-201ENST00000470538 280 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC103987.1-201ENST00000473394 348 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 RPL7P23-201ENST00000493874 747 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC093278.1-201ENST00000494700 600 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC135721.1-201ENST00000497954 479 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 PARP4P3-201ENST00000510265 317 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 RNU7-51P-201ENST00000516560 62 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 Y_RNA.702-201ENST00000516843 96 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AP003730.1-201ENST00000524605 285 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 DEFB108D-201ENST00000527787 222 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 CYCSP29-201ENST00000533731 318 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC034105.3-201ENST00000565294 442 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 GLUD1P4-201ENST00000590914 418 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AP001429.1-201ENST00000602568 530 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 AC103710.2-201ENST00000609912 942 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 MIR8059-201ENST00000620427 81 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 MIR3662-201ENST00000637030 95 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.9□□□□□ -1.79
CTHRC1Q96CG8 LARP1BP1-201ENST00000506036 1359 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 HSPE1P11-201ENST00000339579 310 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 MIR383-201ENST00000362257 73 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 Y_RNA.38-201ENST00000362617 102 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 MIR1-2-201ENST00000384961 85 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 MT-TL1-201ENST00000386347 75 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 ZNF863P-201ENST00000426746 417 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 COX6B1P7-201ENST00000430845 235 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 RPS20P5-201ENST00000434808 360 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 NUTF2P3-201ENST00000448540 384 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC006480.1-201ENST00000449887 378 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 FDX1P2-201ENST00000450769 375 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC006517.1-201ENST00000480485 328 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC117522.1-201ENST00000509821 380 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 RNU6-1095P-201ENST00000516148 108 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AF235103.2-201ENST00000525753 346 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC069240.1-201ENST00000548774 375 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 TVP23BP1-201ENST00000557500 617 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC055876.1-202ENST00000567053 138 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 OR4K8P-201ENST00000578842 1048 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC005730.3-201ENST00000583067 366 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC060780.3-201ENST00000589464 80 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 RMST_9.1-201ENST00000619945 193 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 YWHAEP7-203ENST00000622054 312 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AC006065.5-201ENST00000623427 349 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 AP005264.7-201ENST00000625003 745 ntBASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CTHRC1Q96CG8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTHRC1Q96CG8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms