Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC090337.1-201ENST00000579651 2074 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 RPL23AP32-201ENST00000395315 459 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 RNU6-712P-201ENST00000410558 100 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC127391.1-201ENST00000411737 98 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 RPL23AP89-201ENST00000439324 255 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 USP9YP15-201ENST00000442391 422 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 RPS17P13-201ENST00000448974 407 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 FABP3P2-201ENST00000453169 399 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 UBDP1-202ENST00000457888 382 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 RBM43P1-201ENST00000476891 1081 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 KCTD9P5-201ENST00000504141 1170 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC091133.4-201ENST00000511142 308 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC010493.1-201ENST00000513479 292 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC022483.1-201ENST00000514020 567 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 RN7SKP13-201ENST00000515933 244 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 RNU6-506P-201ENST00000516553 94 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 RNU6-798P-201ENST00000516912 103 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC103783.1-201ENST00000520506 373 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 OR5G4P-201ENST00000525251 760 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC007458.1-201ENST00000542812 373 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC006254.3-201ENST00000603353 884 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 HMGN2P28-201ENST00000606102 262 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AL133173.2-201ENST00000614270 90 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AL732618.1-201ENST00000623251 301 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC091953.2-201ENST00000623979 160 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AC068880.5-201ENST00000624331 290 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 RPS7P15-201ENST00000415804 584 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 CCDC58P2-201ENST00000417131 366 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 PIGFP2-201ENST00000421400 651 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AL358934.1-201ENST00000432346 324 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 FTH1P1-201ENST00000437933 532 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 MTATP6P13-201ENST00000438531 667 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 RPL21P23-201ENST00000446654 460 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC010655.1-201ENST00000449336 292 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC093899.1-201ENST00000457984 376 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AL049873.1-201ENST00000480540 376 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 RPL9P6-201ENST00000492764 598 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC010587.1-201ENST00000505809 469 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 Vault.3-201ENST00000516676 95 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC090281.1-201ENST00000523019 276 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC126177.3-201ENST00000551839 688 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 MIR3146-201ENST00000580367 79 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 COX6CP3-201ENST00000580869 223 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 MTATP6P3-201ENST00000581686 676 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 MIR3118-1-201ENST00000581787 76 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC090616.5-202ENST00000582111 297 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC004908.2-201ENST00000609090 574 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC064801.1-201ENST00000612025 407 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AC009268.2-201ENST00000621925 457 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AP005264.7-201ENST00000625003 745 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 AL049781.1-201ENST00000623195 3585 ntBASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.26□□□□□ -1.73
TRIM43Q96BQ3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms