Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 Y_RNA.598-201ENST00000410480 95 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 RPS7P13-201ENST00000413955 498 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 CCDC58P2-201ENST00000417131 366 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 USP9YP13-201ENST00000417797 480 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 DUTP6-201ENST00000425573 462 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 SNRPEP4-201ENST00000435815 279 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AL022238.1-201ENST00000442557 355 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC010655.1-201ENST00000449336 292 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC098824.1-201ENST00000453565 980 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AP1S2P1-201ENST00000457344 379 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 SNORD121B-201ENST00000458838 81 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 RPL31P61-201ENST00000496160 376 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 SAP18P1-201ENST00000512058 390 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC024909.2-201ENST00000553035 286 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AL391156.1-201ENST00000554965 554 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 HSPE1P5-201ENST00000561489 272 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AL157394.1-201ENST00000562983 1224 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 RN7SL703P-201ENST00000578485 302 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC006130.2-201ENST00000586202 326 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 BNIP3P8-201ENST00000597863 560 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC112191.3-201ENST00000604371 277 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC087752.4-201ENST00000605911 462 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AL139286.2-201ENST00000606838 396 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AL391813.2-201ENST00000609113 322 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC128687.2-201ENST00000609657 566 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AC012150.2-201ENST00000621300 544 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 AL354798.1-201ENST00000622505 329 ntBASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SH3KBP1Q96B97 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AC110774.1-201ENST00000623567 2018 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AC011460.1-201ENST00000636268 1834 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 RNY4P24-201ENST00000362735 96 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 RNU6-1155P-201ENST00000363554 107 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 RNU4-24P-201ENST00000364565 139 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 RNU1-89P-201ENST00000384592 164 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AL451062.2-201ENST00000427515 271 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 RAC1P7-201ENST00000445367 377 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 MTND1P9-201ENST00000453775 944 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 NDUFB4P2-201ENST00000509515 391 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 MTCO3P7-201ENST00000510008 774 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 RNU6-1003P-201ENST00000517099 105 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 RNA5SP179-201ENST00000517284 121 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 SNORA51-201ENST00000606420 132 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AL355472.4-201ENST00000610233 626 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AC011939.3-201ENST00000613686 466 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AC092140.2-201ENST00000618027 521 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AC010149.2-201ENST00000637608 315 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 AC068137.4-201ENST00000638485 296 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.87□□□□□ -1.79
SH3KBP1Q96B97 TEX21P-201ENST00000447107 1476 ntBASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 MIR670-201ENST00000390142 98 ntBASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 DEFB108C-201ENST00000400154 252 ntBASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 FCF1P10-201ENST00000407590 479 ntBASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 Y_RNA.608-201ENST00000410647 95 ntBASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 RN7SKP53-201ENST00000411337 315 ntBASIC3.86□□□□□ -1.79
SH3KBP1Q96B97 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms