Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRF1Q92994 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.07□□□□□ -1.6
BRF1Q92994 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.07□□□□□ -1.6
BRF1Q92994 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF1Q92994 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.07□□□□□ -1.6
BRF1Q92994 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRF1Q92994 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BRF1Q92994 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRF1Q92994 RNU1-108P-201ENST00000362556 161 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 RNA5SP447-201ENST00000363749 119 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 Y_RNA.184-201ENST00000363884 108 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 RNU6-178P-201ENST00000384631 104 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 SNORA11F-201ENST00000408237 128 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.07□□□□□ -1.6
BRF1Q92994 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.07□□□□□ -1.6
BRF1Q92994 OR2AS1P-201ENST00000427827 319 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.07□□□□□ -1.6
BRF1Q92994 RNU7-59P-201ENST00000459101 61 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 RN7SL98P-201ENST00000462271 300 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 RPL7L1P8-201ENST00000469911 741 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 NIP7P2-201ENST00000485801 544 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.07□□□□□ -1.6
BRF1Q92994 RNA5SP228-201ENST00000516232 133 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 RN7SKP256-201ENST00000517201 314 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 AC134698.5-201ENST00000519444 336 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF1Q92994 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF1Q92994 SUMO2P20-201ENST00000520803 283 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.07□□□□□ -1.6
BRF1Q92994 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.07□□□□□ -1.6
BRF1Q92994 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.07□□□□□ -1.6
BRF1Q92994 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.07□□□□□ -1.6
BRF1Q92994 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BRF1Q92994 SCOCP1-201ENST00000554676 349 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 MIR4330-201ENST00000579077 105 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.07□□□□□ -1.6
BRF1Q92994 AC104237.2-201ENST00000612456 443 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.07□□□□□ -1.6
BRF1Q92994 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 AC068831.8-201ENST00000620171 435 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 AP001005.3-201ENST00000622049 129 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.07□□□□□ -1.6
BRF1Q92994 MFSD8-242ENST00000641690 4199 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.07□□□□□ -1.6
BRF1Q92994 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRF1Q92994 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRF1Q92994 AC139713.2-214ENST00000642059 1811 ntBASIC5.07□□□□□ -1.6
BRF1Q92994 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRF1Q92994 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
BRF1Q92994 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.06□□□□□ -1.6
BRF1Q92994 RNU1-94P-201ENST00000362627 173 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 RNU6-278P-201ENST00000390945 109 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 Y_RNA.615-201ENST00000410769 117 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 ELOCP19-201ENST00000411919 318 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 RPS23P10-201ENST00000416185 486 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.06□□□□□ -1.6
BRF1Q92994 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.06□□□□□ -1.6
BRF1Q92994 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.06□□□□□ -1.6
BRF1Q92994 RPL30P3-201ENST00000424262 333 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AL732292.1-201ENST00000426692 226 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AC011998.1-201ENST00000433403 117 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 MTATP6P16-201ENST00000434543 526 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 HLA-N-201ENST00000437516 135 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 Z95327.1-201ENST00000446082 482 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 RNU7-182P-201ENST00000459009 62 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 snoU13.1-201ENST00000459157 104 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 RN7SL738P-201ENST00000470264 297 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.06□□□□□ -1.6
BRF1Q92994 RN7SL459P-201ENST00000481078 302 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AC104164.2-201ENST00000496953 495 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.06□□□□□ -1.6
BRF1Q92994 AP005435.4-201ENST00000529514 284 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AP000857.1-201ENST00000532151 543 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 TRAV8-5-201ENST00000537369 341 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.06□□□□□ -1.6
BRF1Q92994 AL121821.2-201ENST00000556081 394 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 MIR4775-201ENST00000581168 75 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AC068790.4-201ENST00000602474 263 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AL355812.1-201ENST00000603215 216 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.06□□□□□ -1.6
BRF1Q92994 AL445363.3-201ENST00000623080 671 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 AC140479.6-201ENST00000633535 357 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
BRF1Q92994 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.06□□□□□ -1.6
BRF1Q92994 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.06□□□□□ -1.6
BRF1Q92994 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRF1Q92994 ZNF734P-201ENST00000419494 1534 ntBASIC5.06□□□□□ -1.6
BRF1Q92994 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
BRF1Q92994 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
BRF1Q92994 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.06□□□□□ -1.6
BRF1Q92994 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
BRF1Q92994 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF1Q92994 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
BRF1Q92994 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.05□□□□□ -1.6
BRF1Q92994 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.05□□□□□ -1.6
BRF1Q92994 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
BRF1Q92994 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms