Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 HMGB1P12-201ENST00000438594 598 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 RPS27P5-201ENST00000444247 244 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 RNU1-123P-201ENST00000458950 160 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TOPBP1Q92547 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 uc_338.9-201ENST00000617424 182 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 AC009950.2-201ENST00000636548 183 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TOPBP1Q92547 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 RNU6-53P-201ENST00000365367 106 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 RPL19P1-201ENST00000411635 428 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 HMGB1P47-201ENST00000511281 589 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 MYL12BP1-201ENST00000569826 507 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.83□□□□□ -1.96
TOPBP1Q92547 AL121917.1-203ENST00000605534 577 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.83□□□□□ -1.96
TOPBP1Q92547 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
TOPBP1Q92547 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.82□□□□□ -1.96
TOPBP1Q92547 MTND4P23-201ENST00000447723 1363 ntBASIC2.82□□□□□ -1.96
TOPBP1Q92547 Y_RNA.191-201ENST00000363972 113 ntBASIC2.82□□□□□ -1.96
TOPBP1Q92547 RNU6-1251P-201ENST00000364502 107 ntBASIC2.82□□□□□ -1.96
TOPBP1Q92547 RNA5SP167-201ENST00000365461 116 ntBASIC2.82□□□□□ -1.96
TOPBP1Q92547 MTND4P13-201ENST00000402078 1023 ntBASIC2.82□□□□□ -1.96
TOPBP1Q92547 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.82□□□□□ -1.96
TOPBP1Q92547 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.82□□□□□ -1.96
TOPBP1Q92547 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.82□□□□□ -1.96
TOPBP1Q92547 AC109471.1-201ENST00000511631 612 ntBASIC2.82□□□□□ -1.96
TOPBP1Q92547 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.82□□□□□ -1.96
TOPBP1Q92547 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TOPBP1Q92547 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
TOPBP1Q92547 AL355578.1-201ENST00000607405 1328 ntBASIC2.82□□□□□ -1.96
TOPBP1Q92547 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TOPBP1Q92547 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
TOPBP1Q92547 SNORA16.1-201ENST00000364597 132 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 SNORD65-201ENST00000391079 73 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 AL035405.1-201ENST00000400795 710 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.81□□□□□ -1.96
TOPBP1Q92547 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.81□□□□□ -1.96
TOPBP1Q92547 AC089999.1-201ENST00000460336 374 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 SNX5P1-201ENST00000505757 1041 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 RNA5SP102-201ENST00000516865 106 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 RN7SKP234-201ENST00000517173 224 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.81□□□□□ -1.96
TOPBP1Q92547 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.81□□□□□ -1.96
TOPBP1Q92547 ZNF192P1-203ENST00000565888 810 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 MIR4421-201ENST00000578133 69 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.81□□□□□ -1.96
TOPBP1Q92547 RMST_6.1-201ENST00000611980 203 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
TOPBP1Q92547 MTCO1P6-201ENST00000481192 1384 ntBASIC2.81□□□□□ -1.96
TOPBP1Q92547 RNU6-356P-201ENST00000384140 107 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 AL121972.1-201ENST00000402023 252 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 RNU2-37P-201ENST00000410695 177 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 NEK4P1-201ENST00000433383 879 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 BNIP3P2-201ENST00000441221 577 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 SNRPGP3-201ENST00000469405 227 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 AL121594.1-201ENST00000475906 575 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 AC069528.1-202ENST00000482888 637 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 GTF2IP9-201ENST00000502460 301 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 AC013444.2-201ENST00000603317 787 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 AL355816.1-201ENST00000607951 118 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 AF127577.6-201ENST00000623352 2191 ntBASIC2.8□□□□□ -1.96
TOPBP1Q92547 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TOPBP1Q92547 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
TOPBP1Q92547 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TOPBP1Q92547 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.79□□□□□ -1.96
TOPBP1Q92547 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.79□□□□□ -1.96
TOPBP1Q92547 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.79□□□□□ -1.96
TOPBP1Q92547 RPL31P53-201ENST00000457065 348 ntBASIC2.79□□□□□ -1.96
TOPBP1Q92547 AMD1P1-201ENST00000457220 922 ntBASIC2.79□□□□□ -1.96
TOPBP1Q92547 AP000873.1-201ENST00000463987 400 ntBASIC2.79□□□□□ -1.96
TOPBP1Q92547 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.79□□□□□ -1.96
TOPBP1Q92547 AC007375.1-201ENST00000554513 578 ntBASIC2.79□□□□□ -1.96
TOPBP1Q92547 AC124283.4-201ENST00000581815 456 ntBASIC2.79□□□□□ -1.96
TOPBP1Q92547 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
TOPBP1Q92547 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TOPBP1Q92547 AL118496.1-201ENST00000440201 1812 ntBASIC2.79□□□□□ -1.96
TOPBP1Q92547 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TOPBP1Q92547 RNU6-60P-201ENST00000364792 103 ntBASIC2.78□□□□□ -1.96
TOPBP1Q92547 MIR320B1-201ENST00000390209 79 ntBASIC2.78□□□□□ -1.96
TOPBP1Q92547 RNU6-174P-201ENST00000410406 106 ntBASIC2.78□□□□□ -1.96
TOPBP1Q92547 AC005517.2-201ENST00000424673 553 ntBASIC2.78□□□□□ -1.96
TOPBP1Q92547 RPL21P2-201ENST00000440049 481 ntBASIC2.78□□□□□ -1.96
TOPBP1Q92547 RNU7-27P-201ENST00000459281 62 ntBASIC2.78□□□□□ -1.96
TOPBP1Q92547 EIF4EP5-201ENST00000528228 640 ntBASIC2.78□□□□□ -1.96
TOPBP1Q92547 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.78□□□□□ -1.96
TOPBP1Q92547 AC091488.1-201ENST00000604239 660 ntBASIC2.78□□□□□ -1.96
TOPBP1Q92547 AC139769.3-201ENST00000618383 175 ntBASIC2.78□□□□□ -1.96
TOPBP1Q92547 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TOPBP1Q92547 SNORD114-26-201ENST00000363543 72 ntBASIC2.78□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms