Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIX5Q8N196 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIX5Q8N196 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
SIX5Q8N196 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SIX5Q8N196 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SIX5Q8N196 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.62□□□□□ -1.51
SIX5Q8N196 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.62□□□□□ -1.51
SIX5Q8N196 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
SIX5Q8N196 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.62□□□□□ -1.51
SIX5Q8N196 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIX5Q8N196 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SIX5Q8N196 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIX5Q8N196 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIX5Q8N196 AL138820.1-201ENST00000617901 5305 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SIX5Q8N196 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SIX5Q8N196 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.61□□□□□ -1.51
SIX5Q8N196 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIX5Q8N196 RN7SKP104-201ENST00000362605 328 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 RHOT1P2-201ENST00000366423 333 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 GNG5P2-201ENST00000372054 207 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 Y_RNA.489-201ENST00000384410 101 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 RNU6-713P-201ENST00000384761 107 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 EI24P4-201ENST00000423683 1078 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.61□□□□□ -1.51
SIX5Q8N196 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.61□□□□□ -1.51
SIX5Q8N196 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.61□□□□□ -1.51
SIX5Q8N196 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIX5Q8N196 PRDX3P3-201ENST00000447765 522 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 PCMTD1P1-201ENST00000455560 355 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.61□□□□□ -1.51
SIX5Q8N196 Z92846.1-201ENST00000456203 268 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 AL035690.1-201ENST00000490892 383 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 RPS24P16-201ENST00000497294 392 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.61□□□□□ -1.51
SIX5Q8N196 AC004980.4-201ENST00000513375 203 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 SNORD116-26-201ENST00000516006 96 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 AC008694.2-201ENST00000517591 306 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 RAB9BP1-201ENST00000519581 626 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 AC007991.1-201ENST00000522680 631 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 AC022616.4-201ENST00000522985 181 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.61□□□□□ -1.51
SIX5Q8N196 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.61□□□□□ -1.51
SIX5Q8N196 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.61□□□□□ -1.51
SIX5Q8N196 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.61□□□□□ -1.51
SIX5Q8N196 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.61□□□□□ -1.51
SIX5Q8N196 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.61□□□□□ -1.51
SIX5Q8N196 RNU6-85P-201ENST00000605989 107 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 AC062037.2-201ENST00000610137 73 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SIX5Q8N196 AL138825.1-201ENST00000618587 192 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.61□□□□□ -1.51
SIX5Q8N196 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SIX5Q8N196 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIX5Q8N196 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SIX5Q8N196 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SIX5Q8N196 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.6□□□□□ -1.51
SIX5Q8N196 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.6□□□□□ -1.51
SIX5Q8N196 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.6□□□□□ -1.51
SIX5Q8N196 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SIX5Q8N196 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SIX5Q8N196 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIX5Q8N196 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIX5Q8N196 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIX5Q8N196 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SIX5Q8N196 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SIX5Q8N196 Y_RNA.151-201ENST00000363566 112 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 RNU6-379P-201ENST00000363813 104 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 RNU6-1329P-201ENST00000365664 107 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SIX5Q8N196 Y_RNA.485-201ENST00000384395 102 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 RPS15AP6-201ENST00000420703 385 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 GSTM5P1-201ENST00000434751 660 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 AC011816.1-201ENST00000441346 546 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 snoU13.3-201ENST00000459441 104 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 AC008571.1-201ENST00000467232 300 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 AC010655.3-201ENST00000478818 450 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 AC114801.2-201ENST00000503825 781 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.6□□□□□ -1.51
SIX5Q8N196 RNU4-77P-201ENST00000516692 156 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.6□□□□□ -1.51
SIX5Q8N196 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.6□□□□□ -1.51
SIX5Q8N196 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.6□□□□□ -1.51
SIX5Q8N196 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.6□□□□□ -1.51
SIX5Q8N196 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.6□□□□□ -1.51
SIX5Q8N196 RPL23AP87-202ENST00000573039 466 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 BDH2P1-201ENST00000602288 736 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIX5Q8N196 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.6□□□□□ -1.51
SIX5Q8N196 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIX5Q8N196 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SIX5Q8N196 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SIX5Q8N196 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIX5Q8N196 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIX5Q8N196 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SIX5Q8N196 PRO1804-201ENST00000623780 2050 ntBASIC5.6□□□□□ -1.51
SIX5Q8N196 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
SIX5Q8N196 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SIX5Q8N196 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms