Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 ISCUP1-201ENST00000454451 448 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 ATP5LP5-201ENST00000483050 299 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 RNU6-1334P-201ENST00000516032 105 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 H3F3AP1-201ENST00000559984 334 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 AC100827.5-201ENST00000615883 426 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 U6.92-201ENST00000636464 89 ntBASIC5.65□□□□□ -1.5
NPAS3Q8IXF0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
NPAS3Q8IXF0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NPAS3Q8IXF0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.65□□□□□ -1.51
NPAS3Q8IXF0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPAS3Q8IXF0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPAS3Q8IXF0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
NPAS3Q8IXF0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NPAS3Q8IXF0 AC068870.1-201ENST00000563737 2455 ntBASIC5.65□□□□□ -1.51
NPAS3Q8IXF0 AC239868.2-201ENST00000564237 4527 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RNA5SP258-201ENST00000362750 119 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RNU6-290P-201ENST00000365212 101 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RNU6-1329P-201ENST00000365664 107 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RNU6-317P-201ENST00000384031 107 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RNU6-937P-201ENST00000384325 106 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AL023807.1-201ENST00000407932 359 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AC008280.1-201ENST00000418851 412 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 VTI1BP4-201ENST00000427516 527 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 MTND3P9-201ENST00000429526 346 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 MTCO1P5-201ENST00000433573 344 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AL590399.4-201ENST00000436561 601 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RPS11P7-201ENST00000442125 465 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RPL12P39-201ENST00000455456 496 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RPS17P5-201ENST00000498293 408 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AC006427.1-201ENST00000514359 712 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RNU6-1092P-201ENST00000516955 87 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RNU6-64P-201ENST00000517119 105 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AC007458.1-201ENST00000542812 373 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AC137627.1-201ENST00000545761 289 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AC063949.1-201ENST00000552900 865 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AC005951.2-201ENST00000576282 495 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AC090615.1-201ENST00000577519 154 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 MIR6820-201ENST00000611508 62 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 AC000095.2-202ENST00000637415 154 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NPAS3Q8IXF0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 AC011933.2-201ENST00000578539 2790 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 RN7SKP103-201ENST00000363848 320 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 SNORD116-14-201ENST00000383894 92 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 SNORD116-17-201ENST00000383929 92 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 RNU1-136P-201ENST00000384181 164 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 SNORD116-15-201ENST00000384445 92 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 SNORD116-20-201ENST00000384529 92 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 SNORD116-19-201ENST00000384729 92 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 SNORD73A-201ENST00000386062 65 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 RPL11P3-201ENST00000395256 523 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 GLULP6-201ENST00000399502 913 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 RNU2-61P-201ENST00000411069 191 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 AL133384.1-201ENST00000412744 351 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 MTCO1P39-201ENST00000426148 480 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 AC016696.1-201ENST00000446949 318 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 REG1CP-206ENST00000447469 496 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 RNU7-59P-201ENST00000459101 61 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 AC108161.1-201ENST00000461060 402 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 RPL37P6-202ENST00000464216 403 ntBASIC5.63□□□□□ -1.51
NPAS3Q8IXF0 HMGN2P13-201ENST00000476476 274 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms