Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AC068790.3-201ENST00000602988 553 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AL022099.1-201ENST00000604551 712 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 OR10AB1P-201ENST00000609613 938 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AC128687.2-201ENST00000609657 566 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AL158063.1-201ENST00000615349 536 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 MFSD8-236ENST00000641509 4050 ntBASIC4.03□□□□□ -1.76
HERC6Q8IVU3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HERC6Q8IVU3 AL079305.1-201ENST00000623159 3008 ntBASIC4.03□□□□□ -1.77
HERC6Q8IVU3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC007685.1-201ENST00000329806 452 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 RNU4-21P-201ENST00000362802 126 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 RNA5SP322-201ENST00000363617 119 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 RNU6-637P-201ENST00000384050 107 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 RNU6-533P-201ENST00000384144 107 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 RNY3P10-201ENST00000384764 102 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 MIR135A2-201ENST00000384854 100 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 RNU6-882P-201ENST00000391025 103 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 CYCSP46-201ENST00000423569 204 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC233728.2-201ENST00000425348 757 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC005326.1-201ENST00000429197 123 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AF228730.2-201ENST00000438784 848 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AL356535.1-201ENST00000440335 398 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 EPS15P1-201ENST00000448836 336 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 SNRPGP9-201ENST00000456025 225 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 RNA5SP269-201ENST00000459032 137 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AL049873.1-201ENST00000480540 376 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC069499.1-201ENST00000489433 509 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 MTCO2P32-201ENST00000514865 403 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC007424.1-203ENST00000554613 687 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AP005136.1-201ENST00000579765 429 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AP001429.1-201ENST00000602568 530 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC064807.4-201ENST00000607201 407 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC009090.3-201ENST00000616553 565 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC005832.2-201ENST00000538921 1430 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 AC007823.1-201ENST00000569932 1566 ntBASIC4.02□□□□□ -1.77
HERC6Q8IVU3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HERC6Q8IVU3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 MTND5P33-201ENST00000571250 1450 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 RNU6-50P-201ENST00000362356 103 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 RNU6-223P-201ENST00000362830 107 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 MTCO1P39-201ENST00000426148 480 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 MTND4P32-201ENST00000437189 1237 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 TRIM60P18-201ENST00000441518 828 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 GDI2P2-201ENST00000445131 608 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 USP9YP12-201ENST00000450481 570 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 RPL23AP31-201ENST00000456160 467 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AP001486.1-201ENST00000463339 476 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 RPL31P61-201ENST00000496160 376 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 RPL23AP55-201ENST00000498163 452 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC091965.2-201ENST00000512324 613 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 Y_RNA.695-201ENST00000516715 107 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AP000907.2-201ENST00000530827 353 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC135001.1-201ENST00000544546 283 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 VN1R79P-201ENST00000593540 513 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC007687.1-201ENST00000602704 304 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC011468.4-201ENST00000603942 409 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC108479.2-201ENST00000617314 601 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AC048347.1-201ENST00000624621 427 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 AL159972.1-201ENST00000625150 448 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 TAB3P1-202ENST00000452645 1634 ntBASIC4.01□□□□□ -1.77
HERC6Q8IVU3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HERC6Q8IVU3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4□□□□□ -1.77
HERC6Q8IVU3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HERC6Q8IVU3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
HERC6Q8IVU3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms